Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP20_F_A01
(960 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.26
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 33 0.45
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 32 0.78
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.0
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 31 1.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.4
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 3.1
02_05_0686 - 30900748-30902167,30903442-30904742 30 3.1
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 4.2
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 5.5
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.6
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 959 GDXPGGGGXGXXPPXSPXGGXXGXGAXG 876
G PGGGG G P +P GG G G G
Sbjct: 183 GRAPGGGGGGGGPGRAPGGGGGGGGLGG 210
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 959 GDXPGGGGXGXXPPXSPXGGXXGXG 885
G PGGGG G P +P GG G G
Sbjct: 170 GRPPGGGGGGGGPGRAPGGGGGGGG 194
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 959 GDXPGGGGXGXXPPXSPXGGXXGXGA 882
G P GGG G PP P G G GA
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGGA 130
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 32.7 bits (71), Expect = 0.45
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 901 PPXGEXGGXLPXPPPPGXSP 960
PP G+ GG P PPPPG P
Sbjct: 933 PPPGKPGGPPPPPPPPGSLP 952
Score = 31.9 bits (69), Expect = 0.78
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 890 PPXXPPXGXXGXXFPXPPPPG 952
PP PP G G P PPPPG
Sbjct: 929 PPPPPPPGKPGGPPPPPPPPG 949
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.9 bits (69), Expect = 0.78
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 950 PGGGGXGXXPPXSPXGGXXGXGAXG 876
PGGGG G PP GG G G G
Sbjct: 388 PGGGGPGAPPPYHGGGGGGGGGGGG 412
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 476 PPPPRGXGXGXWGXXXXXXXXXXXPPXARXGXPAPPPXG 592
PPPPRG G G G P G P PPP G
Sbjct: 1186 PPPPRGHG-GVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 881 GHXPPXXPPXGXXGXXFPXPPPPGGP 958
G PP PP G G P P PPG P
Sbjct: 1181 GVAPPPPPPRGHGGVGGP-PTPPGAP 1205
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 881 GHXPPXXPPXGXXGXXFPXPPPPGG 955
G PP PP G G P PPP GG
Sbjct: 1107 GAPPPPPPPGGITGV--PPPPPIGG 1129
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 339 TGXXGGXXAXXXPXXPXKXXVXPPXXPPFXSXARGXGGXXFPPXXNPPPPGXXG 500
T G + P P V PP P +PP PPPPG G
Sbjct: 39 TARVGYPQSGPYPYPPPSGAVYPPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQG 92
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/82 (25%), Positives = 22/82 (26%)
Frame = +3
Query: 351 GGXXAXXXPXXPXKXXVXPPXXPPFXSXARGXGGXXFPPXXNPPPPGXXGXXFGAXXXXX 530
G P P P PP S + G PP PPPP
Sbjct: 313 GAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPP---PPPPAAPAAPRPPGPGPG 369
Query: 531 XXXXXXXXXXGGGXPLPPPXXG 596
GGG P PP G
Sbjct: 370 PPPPPGAAGRGGGGPPPPALPG 391
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 959 GDXPGGGGXGXXPPXSPXGGXXGXGAXGXRR 867
G GGGG G PP GG G G G R
Sbjct: 56 GGGYGGGGGGGGPPYYGGGGGGGGGGGGQGR 86
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 227 PXXGXPPXGGGKGXPXXKXPRXXXGXPPXXXXGKKXXNXXNXGXXGXXGPP 379
P G PP KG P P+ PP GKK G PP
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 881 GHXPPXXPPXGXXGXXFPXPPPPGG 955
G PP PP G P PPP GG
Sbjct: 361 GPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 890 PPXXPPXGXXGXXFPXPPPPGGP 958
PP PP P PPPP GP
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGP 362
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 408 PXXPPFXSXARGXGGXXFPPXXNPPPP 488
P PPF S R G PP PPPP
Sbjct: 13 PSPPPFSSRPRVVGPPPPPPSDPPPPP 39
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 901 PPXGEXGGXLPXPPPPGXSP 960
PP G+ GG P PP PG P
Sbjct: 628 PPPGKPGGPPPPPPRPGSLP 647
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 890 PPXXPPXGXXGXXFPXPPPPG 952
PP PP G G P PP PG
Sbjct: 624 PPPPPPPGKPGGPPPPPPRPG 644
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 405 PPXXPPFXSXARGXGGXXFPPXXNPPPPG 491
PP PP + G G PP PPPPG
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPP-PPPPG 259
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 890 PPXXPPXGXXGXXFPXPPPPGGP 958
PP PP G P PPPP P
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPP 571
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,854
Number of Sequences: 37544
Number of extensions: 430818
Number of successful extensions: 1946
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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