Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_P21
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 45 9e-05
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 35 0.094
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.29
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.29
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.29
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.38
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.38
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.50
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.50
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.67
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.67
Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.0
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 4.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.2
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 6.2
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.2
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 44.8 bits (101), Expect = 9e-05
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 8/98 (8%)
Frame = +2
Query: 653 HPVLXKXYXIPXTDDHLXLX----DCXXXXPPPPYPXXXXCPXSSQXPPPLXPYXXTLPX 820
HP Y +P + H D PPPP P SS PPP T P
Sbjct: 93 HPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPP 152
Query: 821 XPTPXXXPPXXP----RXXPXTXXXXSXXXPPXXPPXP 922
P PP P R P T PP PP P
Sbjct: 153 RSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPP 904
PPPP P P PP P P P P PR P T PP
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.7 bits (76), Expect = 0.094
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXP 868
PP P P CP PPP+ P P P PP P P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 731 PPPPY--PXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXP 868
PPPP P CP PP P P P P P P P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXP 868
PPPP P P PPP+ P P P PP P P
Sbjct: 31 PPPPPPMCAPPPLPC-PPPPICPPQFCPPPPMCPPPPPPPPPPMCP 75
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +2
Query: 716 CXXXXPP-PPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSX 892
C PP PP P P PPP P P P PP P P
Sbjct: 23 CSMGPPPCPPPPPPMCAPPPLPCPPP--PICPPQFCPPPPMCPPPPPPPPPP-------- 72
Query: 893 XXPPXXPPXP 922
PP PP P
Sbjct: 73 MCPPPPPPMP 82
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTP 832
PPPP P CP PPP+ Y P P
Sbjct: 64 PPPPPPPPPMCPPP---PPPMPSYSPCQSYAPAP 94
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P PPP P P P PP P P PP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPP-PP-----PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 911 PPXP 922
PP P
Sbjct: 371 PPAP 374
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 734 PPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXXP 913
PPP Q PP P P P P PR P S PP P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP---PPSSGMWPPPPP 301
Query: 914 PXP 922
P P
Sbjct: 302 PPP 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP+ P P P P P P P
Sbjct: 264 PPPP-------PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGM 316
Query: 911 PPXP 922
PP P
Sbjct: 317 PPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P PPP P P P PP P P PP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPP-PP-----PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 911 PPXP 922
PP P
Sbjct: 381 PPAP 384
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 734 PPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXXP 913
PPP Q PP P P P P PR P S PP P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP---PPSSGMWPPPPP 311
Query: 914 PXP 922
P P
Sbjct: 312 PPP 314
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP+ P P P P P P P
Sbjct: 274 PPPP-------PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGM 326
Query: 911 PPXP 922
PP P
Sbjct: 327 PPPP 330
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + P P P T P PP P S PP
Sbjct: 574 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 633
Query: 911 PPXP 922
PP P
Sbjct: 634 PPPP 637
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 782 PPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXXPPXP 922
PPP P + P PP P P PP PP P
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + P P P T P PP P S PP
Sbjct: 400 PPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPP 459
Query: 911 PPXP 922
PP P
Sbjct: 460 PPPP 463
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 782 PPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXXPPXP 922
PPP P + P PP P P PP PP P
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 919 GGGXXGXXGXRXXXXGPWVXXGXXXGXRGGGRXXGEGXXVGX*GGR 782
GGG G G R G W G G GGG G G G GGR
Sbjct: 230 GGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGG-GGR 274
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -3
Query: 919 GGGXXGXXGXRXXXXGPWVXXGXXXGXRGGGRXXGEGXXVGX*GGRXLGXXRTXXXXGIR 740
GGG G G G W G GGGR G G GGR G G
Sbjct: 216 GGGGGGGGGGGYGSGGGW-------GGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYG 268
Query: 739 XGG 731
GG
Sbjct: 269 GGG 271
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP P + P PP P P S PP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP------SMILPPPP 1393
Query: 911 PPXP 922
PP P
Sbjct: 1394 PPLP 1397
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/64 (34%), Positives = 23/64 (35%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG G D G G GG+ G G G G GGG G G
Sbjct: 113 GYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGG--GGGGGGDFGGYGGGGM 170
Query: 741 GGGG 730
GGGG
Sbjct: 171 GGGG 174
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GGG G G
Sbjct: 148 GMGGYGGGGGGGGDFG--GYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGY 205
Query: 741 GGGG 730
GGGG
Sbjct: 206 GGGG 209
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXG--GIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXX 748
G GG GG + G G G G G G G G GGG G
Sbjct: 184 GGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGG 243
Query: 747 G*GGGG 730
G GGGG
Sbjct: 244 GGGGGG 249
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P S+ PPP P P P P + PP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPP--------PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
Query: 911 PPXP 922
PP P
Sbjct: 555 PPLP 558
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPP 847
PPPP P P + PP P P P PP
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPP 508
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPP P P P L P P P P PP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 911 PP 916
PP
Sbjct: 775 PP 776
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXP 856
PPPP P CP PPP + P P P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP-GGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPP-XXPRXXPXTXXXXSXXXPPX 907
PPPP P PPP + P P PP P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 908 XPP 916
PP
Sbjct: 787 PPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPP P P P L P P P P PP P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 911 PP 916
PP
Sbjct: 775 PP 776
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXP 856
PPPP P CP PPP + P P P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP-GGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPP-XXPRXXPXTXXXXSXXXPPX 907
PPPP P PPP + P P PP P P PP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 908 XPP 916
PP
Sbjct: 787 PPP 789
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXP 868
PPPP P P + PPP P T+ P P PP P P
Sbjct: 76 PPPPLPLSN--PPAKPTPPP-PPPKPTIRPPPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXP 868
PPPP P P + PPP P T+ P P PP P P
Sbjct: 298 PPPPLPLSN--PPAKPTPPP-PPPKPTIRPPPIPASPPPRPPASEP 340
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPP P P P L P P P P PP P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 911 PP 916
PP
Sbjct: 358 PP 359
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXP 856
PPPP P CP PPP + P P P P P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP-GGFKGGPPPPPPPGMFAPMAP 381
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPP-XXPRXXPXTXXXXSXXXPPX 907
PPPP P PPP + P P PP P P PP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 908 XPP 916
PP
Sbjct: 370 PPP 372
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPP-- 904
PPPP P P + PP P + P P PP P P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 905 XXPPXP 922
PP P
Sbjct: 295 GSPPPP 300
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP P + P P P PP P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Query: 911 PPXP 922
PP P
Sbjct: 330 PPPP 333
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXT 874
PPPP P + PPP P + P PP PR P T
Sbjct: 264 PPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPT 309
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPP-- 904
PPPP P P + PP P + P P PP P P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 905 XXPPXP 922
PP P
Sbjct: 316 GSPPPP 321
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP P + P P P PP P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Query: 911 PPXP 922
PP P
Sbjct: 351 PPPP 354
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXT 874
PPPP P + PPP P + P PP PR P T
Sbjct: 285 PPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPT 330
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPP-- 904
PPPP P P + PP P + P P PP P P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 905 XXPPXP 922
PP P
Sbjct: 301 GSPPPP 306
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P + PPP P + P P P PP P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Query: 911 PPXP 922
PP P
Sbjct: 336 PPPP 339
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXT 874
PPPP P + PPP P + P PP PR P T
Sbjct: 270 PPPPRTGSPPPPPTGSPPPP--PAGGSPPPPRAGSPPPPPPPRGSPPT 315
>Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical
protein F14F3.3 protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 224 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 400
I+ PT ++ NIE S D +N+D+ K +F + ++ GM + L +
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331
Query: 401 EAVKVFRV 424
VKV RV
Sbjct: 332 SRVKVMRV 339
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG + G G G G GR G GGG W G G
Sbjct: 110 GGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP-GSNGGGDWGGNGGGGRGGG 168
Query: 741 GGGG 730
GG G
Sbjct: 169 GGRG 172
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 916 GGXXGXXGXRXXXXGPWVXXGXXXGXRGGGRXXGEGXXVGX*GGR 782
GG G G G W G G GG G G G GGR
Sbjct: 41 GGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGR 85
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/93 (27%), Positives = 31/93 (33%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G GG +GS G GGG++ G G
Sbjct: 58 GGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYG--GGGGNQGG 115
Query: 741 GGGGXXXXQSXSXKWSSVXGMXXXFXRTGCXGG 643
GGGG +S+ G R G GG
Sbjct: 116 GGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGG 148
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 919 GGGXXGXXGXRXXXXGPWVXXGXXXGXRGGG-RXXGEGXXVGX*GGR 782
GGG G G R G G G GGG R G G G GGR
Sbjct: 30 GGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGGR 76
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXP 856
P P P CP PPP+ P P P P PP P
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICP-----PPPPPPMPCPPPPP 86
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPP 847
PPPP P P PPP P P P P P
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PP P P P SS PPP P L T PP P P S PP
Sbjct: 530 PPRPAPP----PVSSIPPPP--PIAGLLAANGTNVPIPPPPPPPLPQN---LSGAPPPPP 580
Query: 911 PPXP 922
PP P
Sbjct: 581 PPPP 584
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GGGS G G
Sbjct: 98 GGGGGCGGGGGGCGGG-GGGCGGGGGGCGGGGGGCGGGGG-GGCGGGSSGGCGGGSSGGC 155
Query: 741 GGGG 730
GGGG
Sbjct: 156 GGGG 159
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G GGG G G
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 741 GGGG 730
GGG
Sbjct: 176 SGGG 179
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -1
Query: 903 GGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG*GGGGXX 724
GG G G GG G G G G GGG G G GGGG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 723 XXQSXSXKWSSVXGMXXXFXRTGCXGG 643
S G GC GG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G GGGS G G
Sbjct: 105 GGGGGCGGGGGGCGGG-GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGC 163
Query: 741 GGGG 730
GGGG
Sbjct: 164 GGGG 167
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GG + G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGG---GCGGGGGGGCGGGSSGGGGYAVAPSGGGGC 191
Query: 741 GGGG 730
GGGG
Sbjct: 192 GGGG 195
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.6
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GGGS G G
Sbjct: 98 GGGGGCGGGGGGCGGG-GGGCGGGGGGCGGGGGGCGGGGG-GGCGGGSSGGCGGGSSGGC 155
Query: 741 GGGG 730
GGGG
Sbjct: 156 GGGG 159
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G GGG G G
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGS 175
Query: 741 GGGG 730
GGG
Sbjct: 176 SGGG 179
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -1
Query: 903 GGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG*GGGGXX 724
GG G G GG G G G G GGG G G GGGG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Query: 723 XXQSXSXKWSSVXGMXXXFXRTGCXGG 643
S G GC GG
Sbjct: 140 GGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G GGGS G G
Sbjct: 105 GGGGGCGGGGGGCGGG-GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGC 163
Query: 741 GGGG 730
GGGG
Sbjct: 164 GGGG 167
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GG + G
Sbjct: 135 GGGGCGGGSSGGCGGGSSGGCGGGGGG---GCGGGGGGGCGGGSSGGGGYAVAPSGGGGC 191
Query: 741 GGGG 730
GGGG
Sbjct: 192 GGGG 195
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
P P P P P P+ P P P PP P P PP
Sbjct: 212 PGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGP 271
Query: 911 PPXP 922
P P
Sbjct: 272 PGPP 275
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 734 PPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXP 856
P P P S PPPL P P P PP P
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P + PPP P P PP P + PP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPP--PIGGIAPVNAHGAPPPPPLP-------PVGAGAPPPPP 251
Query: 911 PPXP 922
PP P
Sbjct: 252 PPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P + PPP P P PP P + PP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPP--PIGGIAPVNAHGAPPPPPLP-------PVGAGAPPPPP 237
Query: 911 PPXP 922
PP P
Sbjct: 238 PPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PPPP P P + PPP P P PP P + PP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPP--PIGGIAPVNAHGAPPPPPLP-------PVGAGAPPPPP 237
Query: 911 PPXP 922
PP P
Sbjct: 238 PPPP 241
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQX----PPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXX 898
PPPP P C S PPP P P P P P + P
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIV 149
Query: 899 PPXXPPXP 922
PP P
Sbjct: 150 AAAMPPPP 157
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 644 PPXHPVLXKXYXIPXTDDHLXLXDCXXXXPPPPYPXXXXCPXSSQXPPPLXPYXXTLPXX 823
PP P + Y P L D PPPP P Q PP+ P T P
Sbjct: 114 PPPRPPKPEQYKFPPAPSVPLLHDRYFVPPPPPVPPRH---SRVQQSPPV-PIHPTPPVS 169
Query: 824 PTP 832
TP
Sbjct: 170 STP 172
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 644 PPXHPVLXKXYXIPXTDDHLXLXDCXXXXPPPPYPXXXXCPXSSQXPPPLXPYXXTLPXX 823
PP P + Y P L D PPPP P Q PP+ P T P
Sbjct: 114 PPPRPPKPEQYKFPPAPSVPLLHDRYFVPPPPPVPPRH---SRVQQSPPV-PIHPTPPVS 169
Query: 824 PTP 832
TP
Sbjct: 170 STP 172
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG G G RG G G G+ G G GGG G G
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 741 GGGG 730
GGGG
Sbjct: 107 GGGG 110
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +2
Query: 731 PPPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPXX 910
PP PYP + PPP PY P P P P P PP
Sbjct: 98 PPAPYPQHAV---PAPAPPPA-PYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPP-- 151
Query: 911 PPXP 922
PP P
Sbjct: 152 PPAP 155
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +2
Query: 734 PPPYPXXXXCPXSSQXPPPLXPYXXTLPXXPTPXXXP---PXXPRXXPXTXXXXSXXXP- 901
P PY P + PPP PY P P P P P P
Sbjct: 35 PAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPV 94
Query: 902 PXXPPXP 922
P PP P
Sbjct: 95 PAPPPAP 101
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G G G G R GG G G G G GGG G G
Sbjct: 323 GGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSG-GGGGGGGGAAAGGGYNAGG 381
Query: 741 GGGG 730
GGGG
Sbjct: 382 GGGG 385
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G GGG G G
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGG 180
Query: 741 GGGG 730
GGGG
Sbjct: 181 GGGG 184
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G GG GG G G GG G G G G GGG G G
Sbjct: 132 GCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGG-----GGCGGGGGGGCGGGGGGGC 186
Query: 741 GGG 733
GGG
Sbjct: 187 GGG 189
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -1
Query: 921 GXGGXXGGXXXDXXXXVXGXXRGXXGGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG* 742
G G G G G GG G G+ G G K GGS G G
Sbjct: 25 GGGNNGGSGFGGGKNGGTGFGGGNTGGSGFGGGNTGGSGFGGGKAGGSGFGGGNTCGSGF 84
Query: 741 GGG 733
GGG
Sbjct: 85 GGG 87
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +2
Query: 737 PPYPXXXXCPXSSQXPPPLX-PYXXTLPXXPTPXXXPPXXPRXXP-XTXXXXSXXXPPXX 910
PP P + P P PY P P P P P P + PP
Sbjct: 68 PPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPYIPEPVAPVPAPAPVYEPYACAAPPCP 127
Query: 911 PPXP 922
PP P
Sbjct: 128 PPTP 131
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/65 (26%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +2
Query: 731 PPPPYPXXXXCPXS-SQXPPPLXPYXXTLPXXPTPXXXPPXXPRXXPXTXXXXSXXXPPX 907
PPPP P P Q PP P +P P P + P P
Sbjct: 177 PPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPV 236
Query: 908 XPPXP 922
P P
Sbjct: 237 EPSDP 241
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = -3
Query: 916 GGXXGXXGXRXXXXGPWVXXGXXXGXRGG-GRXXGEGXXVGX*GGRXLGXXRTXXXXGIR 740
GG G G GP G G RGG G G G G GG G R G R
Sbjct: 296 GGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGG--GGFRGGDRGGFR 353
Query: 739 XG 734
G
Sbjct: 354 GG 355
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 846 GGIXXGVGSXGRVXX*GXKGGGSWXXIGXXXXXG*GGGG 730
GG VG G G GGG +G G GGGG
Sbjct: 91 GGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGG 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,275,637
Number of Sequences: 27780
Number of extensions: 313943
Number of successful extensions: 1584
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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