Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_P20
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778...    31   1.6  
11_06_0201 + 21178784-21179047,21179519-21180064                       30   2.8  
03_05_0439 + 24319464-24320102                                         29   6.4  

>09_06_0292 +
           22075647-22075691,22077394-22077507,22077602-22077841,
           22077926-22078003,22078094-22078162,22078420-22078545,
           22079108-22079188,22079272-22079460,22079597-22080434,
           22082290-22082411,22082482-22082701,22082910-22083055,
           22083260-22083566,22083886-22084136,22084294-22084533,
           22084930-22085238
          Length = 1124

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +3

Query: 246 EEGRSSALWDRTTMDYSVKPVTTERFSMMTAVS*PARLTAPGVLGPGGDSTNYGGRLDWA 425
           E  R+S +WD+    Y   P  T     +  +  PAR T   +  P G+S+N+G  L  A
Sbjct: 505 ENRRASVVWDQEAGRYVSVPAQTRA---VPGLDLPAR-TPRFLANPTGESSNHGKNLAPA 560

Query: 426 NKNAQA 443
           N ++ A
Sbjct: 561 NASSSA 566


>11_06_0201 + 21178784-21179047,21179519-21180064
          Length = 269

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = +3

Query: 321 FSMMTAVS*PARLTAPGVLGPGGDSTNYGGRLDWANKNAQAAID---INXQIGGRSGMTA 491
           F    AVS PA L A  +LGPGG   +  G L  A   A A           GGR G+  
Sbjct: 72  FPAAEAVSSPAELPATQLLGPGGGGVSPRGWLALARTRAPAIAGGFLARGAPGGRGGVVF 131

Query: 492 SGSGVW 509
              G W
Sbjct: 132 P-DGSW 136


>03_05_0439 + 24319464-24320102
          Length = 212

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +3

Query: 363 APGVLGPGGDSTNYGGRLDWANKNAQAAIDINXQIGGRSGMTASGSGVWDL 515
           AP    PGG     GGR  W    A AA  +    GG +G    G  +W L
Sbjct: 56  APSAWSPGG-----GGRRQWRAAGAAAAKWLPFVAGGAAGRYPYGRPLWGL 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,271,529
Number of Sequences: 37544
Number of extensions: 441779
Number of successful extensions: 839
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)