Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_P19
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p pro...    29   8.6  
AY069828-1|AAL39973.1|  512|Drosophila melanogaster SD07683p pro...    29   8.6  
AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-P...    29   8.6  

>BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p
           protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
 Frame = +2

Query: 515 RVSWKLIALWENNKVYFKILNTERNQYLVLGVGTN---WNGDHMAFGVNSVDSFRA---- 673
           + +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +  ++ A    
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGTRMAYYAFKRK 454

Query: 674 ----QWYLQPAK---YDNDVLFYI-YNREYSKGFDTG 760
                W  +P +   ++N  LF++ + + +  G D G
Sbjct: 455 TGDKAWLEKPLRGVNFNNKQLFFVKFAQTWCNGKDNG 491


>AY069828-1|AAL39973.1|  512|Drosophila melanogaster SD07683p
           protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -3

Query: 154 GTSESAAYRDATKRHRITIAGFIFGASSPVCYPRTNXXILR 32
           G  +S    D TKR R+  A    GAS+  CY   N  ILR
Sbjct: 307 GMKQSNETSDGTKRVRVHSAHTRSGASASACYHCGNLHILR 347


>AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-PA
           protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
 Frame = +2

Query: 515 RVSWKLIALWENNKVYFKILNTERNQYLVLGVGTN---WNGDHMAFGVNSVDSFRA---- 673
           + +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V +  ++ A    
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNVGTRMAYYAFKRK 548

Query: 674 ----QWYLQPAK---YDNDVLFYI-YNREYSKGFDTG 760
                W  +P +   ++N  LF++ + + +  G D G
Sbjct: 549 TGDKAWLEKPLRGVNFNNKQLFFVKFAQTWCNGKDNG 585


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,856,944
Number of Sequences: 53049
Number of extensions: 622466
Number of successful extensions: 2050
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2050
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)