Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_P08
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   0.93 
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     31   1.2  
09_02_0543 + 10427321-10428315,10428440-10429154                       30   2.8  
05_05_0101 - 22398814-22399164                                         29   3.8  
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863...    29   3.8  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.0  
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69...    29   6.6  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +2

Query: 623 PGPRXPPLXXVXGPPPXHXPXXXXAPPPXKXP 718
           P P  PP      PPP   P     PPP K P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGP 344


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 717 GXXXGGGAQXXXGXXXGGGPXTXXKGGXRGPG 622
           G   GGG +   G   GGG      GG RGPG
Sbjct: 78  GGGGGGGYESGGGRGYGGGGRGYESGGGRGPG 109


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 626 GPRXPPLXXVXGPPPXHXPXXXXAPPP 706
           GP  PP   +  PPP   P    APPP
Sbjct: 34  GPPPPPAPDMPPPPPTPAPQSSPAPPP 60


>05_05_0101 - 22398814-22399164
          Length = 116

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -2

Query: 726 VXXGXXXGGGAQXXXGXXXGGGPXTXXKGGXRGPG 622
           V  G   GGGA    G   GGG     +GG RG G
Sbjct: 7   VGQGRLGGGGAGLGGGGGLGGGGGGLGEGGVRGGG 41


>01_03_0117 +
           12684729-12685886,12685978-12686145,12686292-12686336,
           12686438-12687280
          Length = 737

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
 Frame = +2

Query: 623 PGPRXPPLXXVXGPPPXHXPXXXXAPP--PXKXPXXT 727
           P P  PP      PPP H P    APP  P   P  T
Sbjct: 261 PPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPAT 297


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 620 FPGPRXPPLXXVXGPPPXHXPXXXXAPPPXKXP 718
           FP P+ PP+    GPPP   P     PPP   P
Sbjct: 18  FP-PQPPPMNPY-GPPPPQQPAYGHMPPPQGAP 48


>04_01_0069 -
           697811-697876,697956-698166,698265-698359,698448-698513,
           698595-698643,698720-698770,698856-698908,699263-699331,
           699874-699928,700011-700099,700217-700302,700376-700432,
           700575-700716,701637-702032
          Length = 494

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 629 PRXPPLXXVXGPPPXHXPXXXXAPPPXKXP 718
           PR PP      PPP   P    A PP + P
Sbjct: 70  PRPPPPSTTTAPPPPAAPAVTPARPPPQQP 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,955,336
Number of Sequences: 37544
Number of extensions: 314786
Number of successful extensions: 1710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)