Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_P07
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 35 0.091
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 35 0.091
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 35 0.091
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 35 0.091
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.091
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.091
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 33 0.21
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.37
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 32 0.49
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 32 0.64
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 0.85
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 0.85
U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical pr... 31 0.85
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 31 1.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.4
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.4
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 3.4
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 3.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.4
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 3.4
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 3.4
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 3.4
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 29 4.5
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical ... 29 4.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.5
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 29 4.5
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 6.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.0
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 29 6.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 6.0
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 29 6.0
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 28 7.9
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 28 7.9
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 28 7.9
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = -1
Query: 432 EALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQET 253
E L++ + + +E+LRK V+ + + VQE +KL ++ +N++ET
Sbjct: 2547 EKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEET 2606
Query: 252 NEKLAPKIKAAYDDFAKNTQEVIKKIQEA 166
K++ +I ++ + ++ I+ A
Sbjct: 2607 RAKIS-EIAGKAEEITEKANSAMEGIRLA 2634
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = -1
Query: 432 EALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQET 253
E L++ + + +E+LRK V+ + + VQE +KL ++ +N++ET
Sbjct: 2547 EKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEET 2606
Query: 252 NEKLAPKIKAAYDDFAKNTQEVIKKIQEA 166
K++ +I ++ + ++ I+ A
Sbjct: 2607 RAKIS-EIAGKAEEITEKANSAMEGIRLA 2634
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 34.7 bits (76), Expect = 0.091
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 754 AXPXCQPPRXXPXPPXSPPHXXGYXXPPPHYKXLP 858
A P P + P PP PPH Y PPPHY P
Sbjct: 121 AVPAPAPYQQQPPPPPPPPH---YPPPPPHYPPPP 152
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 760 PXCQPPRXXPXPPXSPPHXXGYXXPPP 840
P Q P P PP PP Y PPP
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = -1
Query: 432 EALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQET 253
E L++ + + +E+LRK V+ + + VQE +KL ++ +N++ET
Sbjct: 361 EKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEET 420
Query: 252 NEKLAPKIKAAYDDFAKNTQEVIKKIQEA 166
K++ +I ++ + ++ I+ A
Sbjct: 421 RAKIS-EIAGKAEEITEKANSAMEGIRLA 448
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = -1
Query: 432 EALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQET 253
E L++ + + +E+LRK V+ + + VQE +KL ++ +N++ET
Sbjct: 2547 EKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEET 2606
Query: 252 NEKLAPKIKAAYDDFAKNTQEVIKKIQEA 166
K++ +I ++ + ++ I+ A
Sbjct: 2607 RAKIS-EIAGKAEEITEKANSAMEGIRLA 2634
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.091
Identities = 19/89 (21%), Positives = 43/89 (48%)
Frame = -1
Query: 432 EALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQET 253
E L++ + + +E+LRK V+ + + VQE +KL ++ +N++ET
Sbjct: 2547 EKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANIEET 2606
Query: 252 NEKLAPKIKAAYDDFAKNTQEVIKKIQEA 166
K++ +I ++ + ++ I+ A
Sbjct: 2607 RAKIS-EIAGKAEEITEKANSAMEGIRLA 2634
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -1
Query: 390 EELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDD 211
+ + K+ V + + LQ + VQ + K + SNV E + + I DD
Sbjct: 286 DTIDKSKTTVAADVAKMSGALQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDD 345
Query: 210 FAKNTQEVIKKIQE 169
K ++ K ++E
Sbjct: 346 ITKELEKSAKSLEE 359
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 788 PXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXPP 895
P PP PPL ++ P P P L PP PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 357 KNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKK 178
+N + +K VQ + QK+ KK + NVQ+ +K A K AKN Q++ KK
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKC----AKNVQKMCKK 1320
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -1
Query: 411 QNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPK 232
+N+ A+ ++K KN + +K + + QK+ KK + NVQ+ +K +
Sbjct: 1276 KNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKKYGLE 1335
Query: 231 IKAAYDD 211
+ +D
Sbjct: 1336 VPVYSND 1342
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/98 (25%), Positives = 43/98 (43%)
Frame = -1
Query: 426 LEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNE 247
LE + TA++ ++A PD+ L + L + QNT +++A K + ++ TN+
Sbjct: 197 LEAQLKREADTAQKPKQADPDLLNKVGRLNDLLTSEKQNTRVLQEEVA-KFKAELESTNK 255
Query: 246 KLAPKIKAAYDDFAKNTQEVIKKIQEAXNAKQ*ASILN 133
+ K+ K E K+I A SI N
Sbjct: 256 TMKQKLVHERKTLIKEKLEQGKEITRLLEANAHLSIQN 293
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATAL---REKLQAPVQNTVQESQKLAKKV 274
A+ EA E++R+N ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 273 SSNVQETNEKLAPKIKAA 220
+ V++ + A + A
Sbjct: 1762 KNAVEQGQKASADAARLA 1779
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATAL---REKLQAPVQNTVQESQKLAKKV 274
A+ EA E++R+N ELR+ + D+ + +AL R KL+ + E +++A ++
Sbjct: 1702 AQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANEL 1761
Query: 273 SSNVQETNEKLAPKIKAA 220
+ V++ + A + A
Sbjct: 1762 KNAVEQGQKASADAARLA 1779
>U64833-5|AAK95860.1| 402|Caenorhabditis elegans Hypothetical
protein B0507.10 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.85
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = -1
Query: 453 TRTARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKV 274
TR K A E+ ++ + A+++ + E+ REKL + E +K ++
Sbjct: 45 TREKLKKGAEEKKKEILNQRAKQIEEMEALQERLNAITREKLNVRNDSNKMEVEKRKFEL 104
Query: 273 SSNVQETNEKLAPKIKAAYD--DFAKN----TQEVIKKIQEAXNAKQ 151
+E EKL + + D + KN QE+ KI+E NA+Q
Sbjct: 105 EKLQKELEEKLQIRRQQLNDSAEIIKNGEKIRQEMCNKIREERNAEQ 151
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXPP 895
P PP P P PP+T P T PS R PP P
Sbjct: 144 PRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXPPQ 898
P P P PP PP P P R PP + PP+
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR 158
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 772 PPRXXPXPPXSPPHXXGYXXPPPHYKXLPXFATXPHXKLAP 894
PPR PP PPH G PPP P F P P
Sbjct: 299 PPRGHFPPP--PPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 772 PPRXXPXPPXSPPHXXGYXXPPPHYKXLPXFATXPHXKLAP 894
PPR PP PPH G PPP P F P P
Sbjct: 299 PPRGHFPPP--PPHFMGRGMPPPFMPPPPHFGMGPPRGFMP 337
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXP 853
P P PPG P PP PP P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXP 853
P P PPG P PP PP P P P
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/94 (22%), Positives = 44/94 (46%)
Frame = -1
Query: 450 RTARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVS 271
+ + +E L+ + + E+++ V+ +EK++A + E +K+ K+
Sbjct: 922 KVKKEEERLKAEEEKVKVEKEKVKAEEEKVKVEKERNKEKVKAEEERLKAEEEKV--KIE 979
Query: 270 SNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQE 169
+ E+ KIKAA ++ K E KK++E
Sbjct: 980 KEKVKAEEQ---KIKAAEEERRKERAEDAKKVKE 1010
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXP 853
P P +NPP P PP PP + P P + P
Sbjct: 79 PLPLSNPPA-KPTPPPPPPKPTIRPPPIPASPP 110
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXP 853
P P +NPP P PP PP + P P + P
Sbjct: 301 PLPLSNPPA-KPTPPPPPPKPTIRPPPIPASPP 332
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXP 853
P P PPG P PP PP P P P
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +2
Query: 749 DXPXPXANPPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXP 892
D P P ++PPG P PP PP T P P T PPT P
Sbjct: 236 DEPSP-SDPPGP-PGPPGPP-TRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 773 PPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXP 892
PP P PP P T +T P P PS + PP P
Sbjct: 267 PPSVTPMPPPMPPTPGMT--PRPPPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 773 PPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXP 892
PP P PP P T +T P P PS + PP P
Sbjct: 277 PPSVTPMPPPMPPTPGMT--PRPPPPPSSGMWPPPPPPPP 314
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 104 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 163
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 164 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 199
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 166 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 225
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 226 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 261
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 177 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 236
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 237 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 272
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/88 (27%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 638 GSXPXHHPLPGAXTXAGXKXXPXWXAIMXWPTXXXXXDXPXPXANPPGXXP-XPPXPPLT 814
GS P P G+ AG P A P P P +PP P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 815 XXVTXXPHPT-TXPSXXLRXPPTXNXPP 895
P P + P+ L P PP
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/88 (27%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 638 GSXPXHHPLPGAXTXAGXKXXPXWXAIMXWPTXXXXXDXPXPXANPPGXXP-XPPXPPLT 814
GS P P G+ AG P A P P P +PP P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 815 XXVTXXPHPT-TXPSXXLRXPPTXNXPP 895
P P + P+ L P PP
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/88 (27%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 638 GSXPXHHPLPGAXTXAGXKXXPXWXAIMXWPTXXXXXDXPXPXANPPGXXP-XPPXPPLT 814
GS P P G+ AG P A P P P +PP P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 815 XXVTXXPHPT-TXPSXXLRXPPTXNXPP 895
P P + P+ L P PP
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 104 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 163
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 164 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 199
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 166 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 225
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 226 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 261
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = -1
Query: 444 ARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSN 265
A ++ L+ + QNI E+L +V + L EK++ + Q ++ AK S
Sbjct: 177 AEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERKKREYEQLQKRFAKLQSFR 236
Query: 264 VQ--ETNEKLAPKIKAAYDDFAKNTQEV--IKKIQE 169
Q + E+ ++K Y+ + N + + ++K+ +
Sbjct: 237 PQYMDEYERFEERLKKLYEVYVLNFRNLSYLRKVHD 272
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 755 PXPXANPPGXXPXPPXPPL 811
P P A PPG P P PPL
Sbjct: 431 PLPMAGPPGMFPMMPPPPL 449
>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
protein D1044.6 protein.
Length = 1009
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/100 (21%), Positives = 50/100 (50%)
Frame = -1
Query: 450 RTARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVS 271
R + P E+ N+ E +K ++E ALR++ Q ++ + ++L ++++
Sbjct: 351 RPSSPDSEAEEREHNLRIEKERHQK---ELEFRREALRKREQEREEHKKRAQEELRRQMT 407
Query: 270 SNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAXNAKQ 151
+ ++E+ + A ++ +D A+ E +++I E KQ
Sbjct: 408 AALEESTRRQA-EMNRQIEDEARKRDE-LQRIAEEKKRKQ 445
>AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical
protein M01B12.5a protein.
Length = 506
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = -1
Query: 366 DVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 187
D E+N R+K P + +QE ++ + N +ET E+ + A ++ + +E
Sbjct: 432 DDEENGKKSRKKRAEPTEEEIQEKERKIAMHTRNREETAEERKERKAAVKEEKREQRKEK 491
Query: 186 IKK 178
I K
Sbjct: 492 IPK 494
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 776 PGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXPPQ 898
PG P PP PP T P P P PP P Q
Sbjct: 119 PGGVPAPPNPPRT--CCPPPTPAAPPPPPPPPPPAPEAPTQ 157
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -1
Query: 453 TRTARPKEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNT-VQESQKLAKK 277
T+ R LE +++I + K + +N TA E+L++ + + ++ QK+ ++
Sbjct: 164 TQLRRENVKLEAQKEDILNHTKNSEKMWNERLENITADFERLKSSSKPSGIRADQKMFQE 223
Query: 276 VSSNVQETNEKLAPKIKA 223
+QE N KL ++A
Sbjct: 224 NEMKIQELNRKLKDALEA 241
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 408 NIXXTAEELRKAHPDVEKNATALREKLQAPVQN--TVQESQKLAK--KVSSNVQETNEKL 241
+I AE RK VEKN + EK++ ++ +E +++ K K+ V+E +K
Sbjct: 227 DIKEMAETERKEKEKVEKNKMEMTEKIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKK 286
Query: 240 APKIKAAYDDFAKNTQE 190
+ + + KN +E
Sbjct: 287 KEEKEKRRKEVKKNREE 303
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 366 DVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 187
+++KN TAL EKL+A + Q KK + N++ NEKL + ++ E
Sbjct: 45 EMKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKLTTESAKKVENNPTECTEC 99
Query: 186 IKK 178
+ K
Sbjct: 100 LSK 102
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical protein
B0464.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1
Query: 303 QESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAXNAKQ*ASI 139
++ K AKK S +E + P + K +E +K+QE +AKQ A I
Sbjct: 977 RKKDKAAKKASRKKRERRDSGGPDSNRRDEKKRKRKEERDRKLQEKLSAKQSAKI 1031
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 760 PXCQPPRXXPXPPXSPPHXXGYXXPPPHYKXLPXFATXP 876
P C PP P PP PP P P Y +A P
Sbjct: 60 PMCPPPPPPPPPPMCPPP----PPPMPSYSPCQSYAPAP 94
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -1
Query: 396 TAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 217
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 216 DD 211
D+
Sbjct: 395 DE 396
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 772 PPRXXPXPPXSPPHXXGYXXPPPHYKXLP 858
PP PPH G PPPHY P
Sbjct: 78 PPHHQYHLQYPPPHGLGPPPPPPHYYTQP 106
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = -1
Query: 396 TAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAY 217
T L A V L EK+ + V N +E + KK V+E EK KIK Y
Sbjct: 336 TIAHLDYAEESVHTTKRQLEEKI-SEVNNFKKELIEEFKKCKKGVEEEFEKKFEKIKEDY 394
Query: 216 DD 211
D+
Sbjct: 395 DE 396
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Frame = -1
Query: 507 RAATAQXLRQDXPGXAWXTRT-----ARPK--EALEQSRQNIXXTAEELRKAHPDVEKNA 349
+A A +D AW T A+ K EA + ++ ++ A D + +
Sbjct: 353 KAGDAWDTTKDKASDAWDTTKDKAGEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKS 412
Query: 348 TALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 187
++ EK+ + + ++ A E K+ I AYD + ++
Sbjct: 413 KSMTEKIGDSISGAWESTKDTAVSAKDKTAEAAGKVGDSISGAYDTVKEKASDI 466
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 773 PPGXXPXPPXPPLTXXVTXXPHPTTXPSXXLRXPPTXNXPPQ 898
P G P PP PP P P P P PQ
Sbjct: 92 PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQ 133
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 366 DVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKL 241
+++KN TAL EKL+A + Q KK + N++ NEKL
Sbjct: 45 EMKKNQTALMEKLKAKMSELEQ-----VKKDAENLKLINEKL 81
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 28.3 bits (60), Expect = 7.9
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = -1
Query: 435 KEALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQAPVQNTVQESQKLAKKVSSNVQE 256
K+ LE+ N +L+KA D ++ EK+ V+N E ++L K VSS + +
Sbjct: 209 KDKLEEEYMN---DMRDLKKALKDNQEGL----EKIAKDVKNKEGEIEELKKSVSSEIVK 261
Query: 255 TNE------KLAPKIKAAYDDFAKNTQEVIKK 178
E +L K++ D+ K ++ KK
Sbjct: 262 ATEAAHATDQLRKKLQKQQDEHEKRVEQEHKK 293
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Frame = -1
Query: 507 RAATAQXLRQDXPGXAWXTRT-----ARPK--EALEQSRQNIXXTAEELRKAHPDVEKNA 349
+A A +D AW T A+ K EA + ++ ++ A D + +
Sbjct: 353 KAGDAWDTTKDKASDAWDTTKDKAGEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKS 412
Query: 348 TALREKLQAPVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEV 187
++ EK+ + + ++ A E K+ I AYD + ++
Sbjct: 413 KSMTEKIGDSISGAWESTKDTAVSAKDKTAEAAGKVGDSISGAYDTVKEKASDI 466
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -1
Query: 429 ALEQSRQNIXXTAEELRKAHPDVEKNATALREKLQ------APVQNTVQESQKLAKKVSS 268
+L++ + + T L K +EK+ LRE+ Q A VQ ESQ+ ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 267 NVQETNEK 244
E NEK
Sbjct: 201 QFMEENEK 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,092,887
Number of Sequences: 27780
Number of extensions: 240655
Number of successful extensions: 1620
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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