Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_P01
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-8|AAF36009.2|  184|Caenorhabditis elegans Hypothetical ...    83   3e-16
AC024810-6|AAF60762.2|  180|Caenorhabditis elegans Hypothetical ...    31   1.1  
CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical...    30   2.5  
Z54284-3|CAA91063.1|  666|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>AC024200-8|AAF36009.2|  184|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.14 protein.
          Length = 184

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 33/92 (35%), Positives = 59/92 (64%)
 Frame = +3

Query: 366 MGDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETIVPSFARY 545
           +GD+VF+ E  VVNAA + ++V++G   V+G  CV+++C  +  ++V+PA+ + P ++  
Sbjct: 87  IGDYVFIEEECVVNAAQIYAFVHLGARAVLGNGCVIRECSRVLPDTVVPADALFPPYSTI 146

Query: 546 SGSPAHLITTLPEAMPDLMTEFTKSYYQHFLP 641
            G+PA ++ T P    +LM E    YY +F+P
Sbjct: 147 GGNPAQVVGTEPRCTENLMMEAITMYYDNFVP 178


>AC024810-6|AAF60762.2|  180|Caenorhabditis elegans Hypothetical
           protein Y54E10A.5 protein.
          Length = 180

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
 Frame = +3

Query: 369 GDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDN-------SVLPAETIV 527
           G  + +G+  +       S  Y+G   VIG   VL+D C + D+       +V   + + 
Sbjct: 66  GQPMIIGDWNIFQVHSKSSAKYVGSRNVIGVHAVLEDGCSVSDDCSVGAKCTVFSHQNLE 125

Query: 528 PSFARYSGSPAHLITTLPEAMPDLMTEFTK 617
           PS + Y+ +     T  P        EF +
Sbjct: 126 PSVSVYAATNLSRTTKTPNMTSPHQIEFLR 155


>CU457741-18|CAM36360.1|  365|Caenorhabditis elegans Hypothetical
           protein C42C1.5 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 366 MGDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETI 524
           +G++ +V  + V     +GS+V I    VIG   V+KD   +   SVLP ++I
Sbjct: 302 IGNYSWVSGSIVGRKCHIGSWVRIENICVIGDDVVVKDELYLNGASVLPHKSI 354



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +3

Query: 384 VGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETIVP 530
           +G  + V+ ++VG   +IG  V I   CV+ D  +++D   L   +++P
Sbjct: 302 IGNYSWVSGSIVGRKCHIGSWVRIENICVIGDDVVVKDELYLNGASVLP 350


>Z54284-3|CAA91063.1|  666|Caenorhabditis elegans Hypothetical
           protein D2085.3 protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/60 (25%), Positives = 31/60 (51%)
 Frame = +3

Query: 366 MGDHVFVGENTVVNAAVVGSYVYIGKNVVIGRRCVLKDCCMIEDNSVLPAETIVPSFARY 545
           +G H  +   T + ++++G    IG+N VI     + D  +I + + +P E+I+ +   Y
Sbjct: 348 IGAHTEISSKTRITSSMIGKNCKIGENCVI-EYAFIGDDVVIPNGAHIPKESIIGNGVMY 406


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 550 PEYLAKEGTIVSAGRTELSSIMQQSLSTHLLPITTFFPM*TYEPTTAAFTTVFSPTKT*S 371
           P   A++  I     T+ S+ +QQS     +P+T    +    PT+A    V SPT    
Sbjct: 760 PHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTMIANIPAMSPTSAQPQPVLSPTSAAV 819

Query: 370 PI 365
           P+
Sbjct: 820 PV 821


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 550 PEYLAKEGTIVSAGRTELSSIMQQSLSTHLLPITTFFPM*TYEPTTAAFTTVFSPTKT*S 371
           P   A++  I     T+ S+ +QQS     +P+T    +    PT+A    V SPT    
Sbjct: 760 PHSSAQQQPIPPPLSTQTSAEIQQSAQQPSVPVTMIANIPAMSPTSAQPQPVLSPTSAAV 819

Query: 370 PI 365
           P+
Sbjct: 820 PV 821


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,578
Number of Sequences: 27780
Number of extensions: 324849
Number of successful extensions: 2065
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)