Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_O24
(991 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.062
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.082
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.25
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.4
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.062
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 685 TSXXXLRPXNTPXPHXPHPXPPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPAP 843
T LRP + P P P P PP P P P P P +P
Sbjct: 132 TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = +3
Query: 717 PXXPPSPPXPPPXXQXPXRXXQPXXXPXXPRSPAXXXPYXRPXXPXXSTXXXXXXXXA-T 893
P P+PP P + P P P SPA P P S+ A
Sbjct: 124 PPSAPAPPTPQSELRPP--TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 894 XXXXSXPXXRXPPPPXPP 947
S P PP PP
Sbjct: 182 KSPPSAPSLPSAVPPMPP 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.082
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 688 SXXXLRPXNTPXPHXPHPXPPPXXXPPXAXXNPXXXPXXPA--PRXPXXPTPA 840
S +RP + P P PPP PP + P P PA P P P PA
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPP---PPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 706 PXNTPXPHXPHPXPPPXXXPPXAXXNPXXXPXXP-APRXPXXPTPAP 843
P +TP P P PP P P P P AP P P AP
Sbjct: 1686 PVSTP-PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +1
Query: 715 TPXPHXPHPXPPPXXXPPXAXXNPXXXPXX-PAPRXPXXPTP 837
TP P P PPP PP P P PA P P P
Sbjct: 1706 TPPP-PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 674 PPPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLP 772
PPP P PP P P PP PLP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPP---PPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.25
Identities = 25/92 (27%), Positives = 30/92 (32%)
Frame = +1
Query: 565 PSTXTPXXLXXFXPPLAPXXTXNATXVPXIXAMGXPSXXXTSXXXLRPXNTPXPHXPHPX 744
PS P P P + A VP P +S + P P P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPS-GAPPVPKPSVAAPPVPAPSSG--IPPVPKPAAGVP-PV 1191
Query: 745 PPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPA 840
PPP PP + P P P PTP+
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 31.1 bits (67), Expect = 0.25
Identities = 27/93 (29%), Positives = 29/93 (31%)
Frame = +1
Query: 565 PSTXTPXXLXXFXPPLAPXXTXNATXVPXIXAMGXPSXXXTSXXXLRPXNTPXPHXPHPX 744
PS P P P + VP A G P S P P P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVPPPSEAP--PVPKPSVGVP-PV 1210
Query: 745 PPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPAP 843
PPP PP + P P P P PAP
Sbjct: 1211 PPPSTAPPVPTPSAGLPPV-PVPTAKAPPVPAP 1242
Score = 30.3 bits (65), Expect = 0.44
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 607 PLAPXXTXNATXVPXIXAMGXPSXXXTSXXXLRPXNTPXPHXPHPXPPPXXXPPXAXXNP 786
P P + +A +P + + P TS + ++ P P P P P P + P
Sbjct: 1022 PPVPLPSADAPPIP-VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP-SIPAP 1079
Query: 787 XXXPXXPAPR-XPXXPTPA 840
P PAP P P P+
Sbjct: 1080 SGAPPVPAPSGIPPVPKPS 1098
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +2
Query: 677 PPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXX 856
PP S P PP P+ P P P PP+P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 857 LHPP 868
PP
Sbjct: 1110 AVPP 1113
Score = 29.5 bits (63), Expect = 0.77
Identities = 25/93 (26%), Positives = 31/93 (33%)
Frame = +1
Query: 565 PSTXTPXXLXXFXPPLAPXXTXNATXVPXIXAMGXPSXXXTSXXXLRPXNTPXPHXPHPX 744
PST P + PP+ + + P + A PS S P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA---PSSEIPS--------IPAPSGAPPV 1085
Query: 745 PPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPAP 843
P P PP + P P P P PAP
Sbjct: 1086 PAPSGIPPVPKPS-VAAPPVPKPSVAVPPVPAP 1117
Score = 29.5 bits (63), Expect = 0.77
Identities = 20/85 (23%), Positives = 23/85 (27%)
Frame = +2
Query: 716 PPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXXLHPPTFPSXRXNP 895
PP P PP + P PP+P P P P PS P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 896 SXXXXPXXPXTXPAXXXXLVPXXXS 970
P P+ VP S
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSS 1176
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = +2
Query: 716 PPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXXLHPP 868
PP P P+ PP + P PP+P L P P PP
Sbjct: 1189 PPVPP-PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 4.1
Identities = 21/94 (22%), Positives = 24/94 (25%)
Frame = +2
Query: 677 PPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXX 856
PP P P P P P+P PP+P + P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA----PPVPAPSSGIPPVPKPAA 1186
Query: 857 LHPPTFPSXRXNPSXXXXPXXPXTXPAXXXXLVP 958
PP P P P P VP
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/60 (25%), Positives = 18/60 (30%)
Frame = +2
Query: 716 PPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXXLHPPTFPSXRXNP 895
PP P + PP P PP+P + P P P PS P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/68 (23%), Positives = 21/68 (30%)
Frame = +2
Query: 677 PPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPXX 856
PP + P P T P P P+P + PP+P + P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 857 LHPPTFPS 880
P PS
Sbjct: 1082 APPVPAPS 1089
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/93 (24%), Positives = 25/93 (26%)
Frame = +1
Query: 565 PSTXTPXXLXXFXPPLAPXXTXNATXVPXIXAMGXPSXXXTSXXXLRPXNTPXPHXPHPX 744
PS P P P + A VP G P S + P P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPV--PSGAPPVPKPS---VAAPPVPAPSGAPPV 1161
Query: 745 PPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPAP 843
P P P P P P P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 26.2 bits (55), Expect = 7.1
Identities = 21/95 (22%), Positives = 27/95 (28%)
Frame = +2
Query: 674 PPPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPX 853
PP + P P P P P+P + PP+P + P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS----GIPPVPKPAAGVPPVPPPS 1195
Query: 854 XLHPPTFPSXRXNPSXXXXPXXPXTXPAXXXXLVP 958
P PS P P P+ VP
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/103 (24%), Positives = 30/103 (29%), Gaps = 4/103 (3%)
Frame = +2
Query: 674 PPPTXXXXSCDPXTPPXPTXPTRXPPXXXXPL--PXXPTXXXXXXPPLPGXXXXLXPPXX 847
PPP+ S P +PP P P P P P L PP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 848 PXXLH--PPTFPSXRXNPSXXXXPXXPXTXPAXXXXLVPXXXS 970
P + P + N S P P + A L P S
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS 359
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/88 (25%), Positives = 26/88 (29%)
Frame = +2
Query: 674 PPPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPX 853
PP + P P P+ P PP P PPLP + PP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLPAG 462
Query: 854 XLHPPTFPSXRXNPSXXXXPXXPXTXPA 937
P P P+ P P PA
Sbjct: 463 MPAAPPLP-----PAAPAPPPAPAPAPA 485
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/68 (25%), Positives = 20/68 (29%)
Frame = +2
Query: 674 PPPTXXXXSCDPXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXPX 853
PPP + P P +R P P P PPL PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 854 XLHPPTFP 877
PP+ P
Sbjct: 421 PSLPPSAP 428
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 707 PXTPPXPTXPTRXPPXXXXPLPXXPTXXXXXXPPLPGXXXXLXPPXXP 850
P PP PT P P P PP PG PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/62 (25%), Positives = 18/62 (29%)
Frame = +2
Query: 566 PPPXPPSPSXXXXXXXXXXXXXXXXXXXXXXXWVXXPPPTXXXXSCDPXTPPXPTXPTRX 745
PPP PP P+ + PPT DP P P P
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEI---PPTYTPKQADPLPAPPPPPPPTL 246
Query: 746 PP 751
PP
Sbjct: 247 PP 248
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 712 NTPXPHXPHPX--PPPXXXPPXAXXNPXXXPXXPAPRXPXXPTPA 840
N P P+ PPP PP A P P P P PA
Sbjct: 154 NAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
Score = 22.6 bits (46), Expect(2) = 6.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 699 PATLXHPXXPPSPPXPPP 752
PAT P PP PPP
Sbjct: 179 PATSLPSDYNPPPPPPPP 196
Score = 21.8 bits (44), Expect(2) = 6.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 729 PSPPXPPPXXQXP 767
P+PP PPP P
Sbjct: 236 PAPPPPPPPTLPP 248
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +1
Query: 706 PXNTPXPHXPHPXPPPXXXPPXAXXNPXXXPXXPAPRXPXXPTP 837
P P P+ P P P PP P P P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 927 PPPPXPPLXFHXXXHPP 977
PPPP PP F PP
Sbjct: 9 PPPPPPPPGFEPPSQPP 25
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,886,400
Number of Sequences: 5004
Number of extensions: 23515
Number of successful extensions: 217
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 511279616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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