Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_O22
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-5|CAB03065.1| 151|Caenorhabditis elegans Hypothetical pr... 151 7e-37
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.003
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.003
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.003
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 40 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.023
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.023
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.50
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.88
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 0.88
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 8.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 8.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 8.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.2
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 8.2
>Z81077-5|CAB03065.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.6 protein.
Length = 151
Score = 151 bits (366), Expect = 7e-37
Identities = 76/139 (54%), Positives = 89/139 (64%)
Frame = +2
Query: 107 LXKKXIFRKFTYRGVDLXQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRXAXK 286
L KK FRKF YRGVDL QLLDM EQ +L+ GLKRK +AL+ K++ A K
Sbjct: 12 LKKKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKK 71
Query: 287 XAPPNXXPXIXXTHLXNMIIXPEMVXSIVXIYNXKTFNXXEIKPXMIXHYLXEFSVTYKP 466
A P THL +MII PE+V ++ IYN K FN EIKP MI YL EF+++YKP
Sbjct: 72 AAGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIKPEMIGFYLGEFAISYKP 131
Query: 467 VKHXXPXIXATHSSRFIPL 523
VKH P I ATHSSRFIPL
Sbjct: 132 VKHGRPGIGATHSSRFIPL 150
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +3
Query: 654 PPPXXXXXPX---PPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXX 824
PPP P PP P L P P PP PP P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 825 XPXPXXXXPXXPPXPPXP 878
P P PP PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXP 836
PP P PP P P P P PP PP P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 837 XXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP P PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/89 (24%), Positives = 22/89 (24%)
Frame = +1
Query: 604 PXXXPXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPX 783
P P P P P PP G PP P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 784 XPPPPXXXXXPXXXXXXXXXXXPXXPPPP 870
PPP P P PPPP
Sbjct: 767 GCPPP-----PPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/91 (21%), Positives = 20/91 (21%)
Frame = +2
Query: 647 PPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXXXPXPX 826
PP P P P P P P PP P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 827 XXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P PP P PP
Sbjct: 776 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +3
Query: 654 PPPXXXXXPX---PPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXX 824
PPP P PP P L P P PP PP P P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 825 XPXPXXXXPXXPPXPPXP 878
P P PP PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXP 836
PP P PP P P P P PP PP P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 837 XXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP P PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/89 (24%), Positives = 22/89 (24%)
Frame = +1
Query: 604 PXXXPXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPX 783
P P P P P PP G PP P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 784 XPPPPXXXXXPXXXXXXXXXXXPXXPPPP 870
PPP P P PPPP
Sbjct: 767 GCPPP-----PPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/91 (21%), Positives = 20/91 (21%)
Frame = +2
Query: 647 PPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXXXPXPX 826
PP P P P P P P PP P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 827 XXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P PP P PP
Sbjct: 776 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +3
Query: 654 PPPXXXXXPX---PPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXX 824
PPP P PP P L P P PP PP P P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 825 XPXPXXXXPXXPPXPPXP 878
P P PP PP P
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
Score = 36.7 bits (81), Expect = 0.023
Identities = 24/88 (27%), Positives = 24/88 (27%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXP 836
PP P PP P P P P PP PP P P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPP------PPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 837 XXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP P PP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/89 (24%), Positives = 22/89 (24%)
Frame = +1
Query: 604 PXXXPXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPX 783
P P P P P PP G PP P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 784 XPPPPXXXXXPXXXXXXXXXXXPXXPPPP 870
PPP P P PPPP
Sbjct: 350 GCPPP-----PPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/91 (21%), Positives = 20/91 (21%)
Frame = +2
Query: 647 PPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXXXPXPX 826
PP P P P P P P PP P P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 827 XXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P PP P PP
Sbjct: 359 PPGGFKGGPPPPPPPGMFAPMAPVIPDYLPP 389
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/93 (30%), Positives = 28/93 (30%)
Frame = -3
Query: 877 GXGGXGGXXGXXXXGXGXXXXGAXXXXXGXGGXXXXXGGXGXXGXXXXXXXGXGSXXXXX 698
G GG GG G G G G GG GG G G G G
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFG-------GYGGGGMGG 172
Query: 697 GXXGGXGXXXXXGGGXXXXXXGXXXGXXXXXGY 599
G GG G GGG G G GY
Sbjct: 173 GGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGY 205
Score = 32.7 bits (71), Expect = 0.38
Identities = 24/85 (28%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Frame = -3
Query: 871 GGXGGXXGXXXXG-XGXXXXGAXXXXXGXGGXXXXXGGXGXXGXXXXXXXGXGSXXXXXG 695
GG G G G G G G GG GG G G G G
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGY 165
Query: 694 XXGGXGXXXXXGGGXXXXXXGXXXG 620
GG G GGG G G
Sbjct: 166 GGGGMGGGGYGGGGDGGYGGGGFGG 190
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 654 PPPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXP- 830
PPP P PP P + P P P PP P P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 831 --XPXXXXPXXPPXPP 872
P PP PP
Sbjct: 324 RFGPPGMGGMPPPPPP 339
Score = 33.5 bits (73), Expect = 0.22
Identities = 27/106 (25%), Positives = 27/106 (25%), Gaps = 7/106 (6%)
Frame = +2
Query: 623 PXXPPXXXP---PXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPP--- 784
P PP P P P P P P P P P P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 785 -XXPXXRXXXXPXPXXXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P P P P PP P P P PP
Sbjct: 324 RFGPPGMGGMPPPP--PPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 4/92 (4%)
Frame = +1
Query: 616 PXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPXXPPP 795
P P P P P P P P PP P P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 796 PXXXXXP----XXXXXXXXXXXPXXPPPPXXP 879
P P P PPP P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/88 (23%), Positives = 22/88 (25%), Gaps = 4/88 (4%)
Frame = +3
Query: 621 PXXXPXXXXXXPPPXXXXXPXPPXX----PXXXXLLPXPXXXXXXXPXXPXPPXXXXXPP 788
P P PP P PP P + P P P PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 789 XPXXXXXAPXXXXPXPXXXXPXXPPXPP 872
P P P P PP PP
Sbjct: 359 GPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = +2
Query: 632 PPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXX 811
PP PP P P P P P P PP P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 812 XPXPXXXPXXXXXPXXPXPPXPXXPXXAP 898
P P P P PP P P
Sbjct: 321 PPSRFGPPGMGGMP-PPPPPGMRYPGGMP 348
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP P P P P PP PP P PP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 654 PPPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXP- 830
PPP P PP P + P P P PP P P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 831 --XPXXXXPXXPPXPP 872
P PP PP
Sbjct: 334 RFGPPGMGGMPPPPPP 349
Score = 33.5 bits (73), Expect = 0.22
Identities = 27/106 (25%), Positives = 27/106 (25%), Gaps = 7/106 (6%)
Frame = +2
Query: 623 PXXPPXXXP---PXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPP--- 784
P PP P P P P P P P P P P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 785 -XXPXXRXXXXPXPXXXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P P P P PP P P P PP
Sbjct: 334 RFGPPGMGGMPPPP--PPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/92 (23%), Positives = 22/92 (23%), Gaps = 4/92 (4%)
Frame = +1
Query: 616 PXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPXXPPP 795
P P P P P P P P PP P P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 796 PXXXXXP----XXXXXXXXXXXPXXPPPPXXP 879
P P P PPP P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/88 (23%), Positives = 22/88 (25%), Gaps = 4/88 (4%)
Frame = +3
Query: 621 PXXXPXXXXXXPPPXXXXXPXPPXX----PXXXXLLPXPXXXXXXXPXXPXPPXXXXXPP 788
P P PP P PP P + P P P PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 789 XPXXXXXAPXXXXPXPXXXXPXXPPXPP 872
P P P P PP PP
Sbjct: 369 GPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = +2
Query: 632 PPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXX 811
PP PP P P P P P P PP P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 812 XPXPXXXPXXXXXPXXPXPPXPXXPXXAP 898
P P P P PP P P
Sbjct: 331 PPSRFGPPGMGGMP-PPPPPGMRYPGGMP 358
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP P P P P PP PP P PP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/92 (28%), Positives = 26/92 (28%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G G GG
Sbjct: 98 GCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG--GCGGGGGGGCGGGGGGGCGGGGGG 155
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G G
Sbjct: 156 CGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGG G G GGGG G G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G G GG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG-GGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSG 219
Score = 31.5 bits (68), Expect = 0.88
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -2
Query: 869 GGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXXXXX 690
GGGG G G GGGG G G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG----GGGGCGGGGGCGGGGGGCGGGGGGC 117
Query: 689 XGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G G
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/92 (25%), Positives = 23/92 (25%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGG G G GGGG G G G GG
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
GGG G G G G G
Sbjct: 167 GGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G GG
Sbjct: 210 GGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGG---GYST 266
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXG 615
G GGG G G G G
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGG G G GGGG G G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 32.3 bits (70), Expect = 0.50
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G G GG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGG-GGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSG 219
Score = 31.5 bits (68), Expect = 0.88
Identities = 25/89 (28%), Positives = 25/89 (28%)
Frame = -2
Query: 869 GGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXXXXX 690
GGGG G G GGGG G G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGG----GGGGCGGGGGCGGGGGGCGGGGGGC 117
Query: 689 XGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G GGG G G G G G G
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/92 (25%), Positives = 23/92 (25%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGG G G GGGG G G G GG
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
GGG G G G G G
Sbjct: 167 GGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G GG
Sbjct: 210 GGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGG---GYST 266
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXG 615
G GGG G G G G
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGG 294
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +2
Query: 599 VTPXXXXXPXXPPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXX 778
V P P PP P P P P P + P P P P
Sbjct: 198 VDPSDEPSPSGPPSPGP-VDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRR 256
Query: 779 PPXXPXXRXXXXPXPXXXP 835
PP P P P P
Sbjct: 257 PPGPPGPPTRRPPGPPGPP 275
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 717 PXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXPPXP 878
P P P P PP P P P P PP PP P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.88
Identities = 23/82 (28%), Positives = 24/82 (29%)
Frame = +3
Query: 633 PXXXXXXPPPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXA 812
P PPP PP P + P P P P PP PP P
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGG--IPPPPPMFAGGIP--PPPPMMGGIPPPPPMFGAP 114
Query: 813 PXXXXPXPXXXXPXXPPXPPXP 878
P P P PP P P
Sbjct: 115 PPPPPPSGLGVAPQ-PPRPKTP 135
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +3
Query: 756 PXP-PXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXPPXP 878
P P P PP P P P P P PP PP P
Sbjct: 48 PMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 740 PXXXXPXXPXXXXPPXXPXXRXXXXPXPXXXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P P PP P P P P P PP P P P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 717 PXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXPPXP 878
P P P P PP P P P P P PP PP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCP--PPPPPMP 82
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/92 (27%), Positives = 25/92 (27%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGGXXGXXXXGXXXXXXXGXXXXGGXE*XXXX 699
G GGGG G G GGGG G G G GG
Sbjct: 784 GSSGGGGGGG-------NGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGN 836
Query: 698 XXXXGPXXXXXGGGXXXGXXXGXGXGXGXXXG 603
G G G G G G G G G
Sbjct: 837 GNGGGAGDGNGGAGAGNGNGAGAGNGNGAGAG 868
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/74 (25%), Positives = 20/74 (27%), Gaps = 2/74 (2%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXP--XXXXXAPXXXXP 830
P P PP +P P P P P P AP P
Sbjct: 73 PQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQP 132
Query: 831 XPXXXXPXXPPXPP 872
P P PP PP
Sbjct: 133 PPPPPPPHYPPPPP 146
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 5/77 (6%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAP-----XX 821
P P PP P +P P P P PP PP AP
Sbjct: 103 PQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDH 162
Query: 822 XXPXPXXXXPXXPPXPP 872
P P PP P
Sbjct: 163 SAPRPAYIEHSAPPPQP 179
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = +1
Query: 616 PXPXPXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPXXPPP 795
P P P P P P + PP P P PPP
Sbjct: 78 PAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPP 137
Query: 796 PXXXXXPXXXXXXXXXXXPXXPPPPXXPXS 885
P P P PPPP P S
Sbjct: 138 PPHYPPP----------PPHYPPPPPAPHS 157
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/96 (22%), Positives = 23/96 (23%), Gaps = 8/96 (8%)
Frame = +3
Query: 657 PPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXX--- 827
P P PP P +P P P P P P AP
Sbjct: 58 PQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPY 117
Query: 828 -----PXPXXXXPXXPPXPPXPXXXXXXXXXXXXPP 920
P P PP PP P PP
Sbjct: 118 PQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = -2
Query: 878 GXXGGGGXXGXXXXXXXXXXXGXXXXXGGGG--XXGXXXXGXXXXXXXGXXXXGGXE*XX 705
G GGGG G G GGGG G G GG
Sbjct: 89 GGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGP 148
Query: 704 XXXXXXGPXXXXXGGGXXXGXXXGXGXGXG 615
G GGG G G G G G
Sbjct: 149 PGSNGGGDWGGNGGGGRGGGGGRGGGGGGG 178
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +3
Query: 678 PXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXX 857
P PP P L PP PP P P P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 858 PPXPPXP 878
PP PP P
Sbjct: 297 PPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +3
Query: 678 PXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXX 857
P PP P L PP PP P P P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 858 PPXPPXP 878
PP PP P
Sbjct: 318 PPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = +3
Query: 678 PXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXX 857
P PP P L PP PP P P P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 858 PPXPPXP 878
PP PP P
Sbjct: 303 PPPPPPP 309
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXXPXPXXXXPXXPPXP 869
P P PP PP P P P P PP P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +2
Query: 716 PXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXXXPXPXXXPXXXXXPXXPXPPXPXXP 886
P P P P P PP P P P P P P P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +2
Query: 632 PPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXX 811
PP PP P P TP P P P P P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP--PPRRPPMTPPS---PQRRPPRTPP 176
Query: 812 XPXPXXXPXXXXXPXXPXPP 871
P P P P P PP
Sbjct: 177 SPEPRNPPRTPPSPIPPPPP 196
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +1
Query: 628 PXPXXXPXXXPPPXXXXXGPXXSXXXXXYSXPPXXXXPXXXXXXXPXXXXPXXPPPP 798
P P P PP P + PP P P P PPPP
Sbjct: 689 PRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 5/78 (6%)
Frame = +3
Query: 654 PPPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXX-----PPXPXXXXXAPX 818
PPP P P P P P P PP PP P P
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPM 767
Query: 819 XXXPXPXXXXPXXPPXPP 872
P P P PP
Sbjct: 768 SSFPPPPRGGMHHMPPPP 785
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = +3
Query: 654 PPPXXXXXPXPPXXPXXXXLLPXPXXXXXXXPXXPXPPXXXXXPPXPXXXXXAPXXXXPX 833
PPP P PP LL P P PP PP P AP P
Sbjct: 535 PPPVSSIPPPPPIA----GLLAA---NGTNVPIPPPPP-----PPLPQNLSGAPPPPPPP 582
Query: 834 PXXXXPXXPPXPP 872
P PP PP
Sbjct: 583 PPMLGGPPPPPPP 595
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Frame = +1
Query: 634 PXXXPXXXPPPXXXXXGPXXSXXXXXYS---XPPXXXXPXXXXXXXPXXXXPXXPPPP 798
P P PPP P S S PP P P P PPPP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXX-PXPXXXXPXXPPXPPXP 878
P P P P P AP P P P PP PP P
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP 160
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXX-PXPXXXXPXXPPXPPXP 878
P P P P P AP P P P PP PP P
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP 155
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXX-PXPXXXXPXXPPXPPXP 878
P P P P P AP P P P PP PP P
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP 162
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/74 (22%), Positives = 17/74 (22%)
Frame = +2
Query: 647 PPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXXXPXPX 826
P P P AP P P P P PP P P P
Sbjct: 51 PSDLPDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPT 110
Query: 827 XXPXXXXXPXXPXP 868
P P P
Sbjct: 111 RLPRPSRSPHSDAP 124
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXX-PXPXXXXPXXPPXPPXP 878
P P P P P AP P P P PP PP P
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGP 155
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/96 (22%), Positives = 22/96 (22%)
Frame = +2
Query: 632 PPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXPXXPXXXXPPXXPXXRXXX 811
PP P P P A P P P P P P P
Sbjct: 49 PPPPMPAPAPAYNPYPCA--NPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPYIPEPV 106
Query: 812 XPXPXXXPXXXXXPXXPXPPXPXXPXXAPXXXXXPP 919
P P P P P P P PP
Sbjct: 107 APVPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPP 142
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/59 (27%), Positives = 17/59 (28%), Gaps = 2/59 (3%)
Frame = +2
Query: 623 PXXPPXXXPPXXPXXXXXPXAPXXPXXXXXTPXPXXXXXPXXXXP--XXPXXXXPPXXP 793
P PP PP P P P P + P P P P PP P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPP 1394
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +3
Query: 747 PXXPXPPXXXXXPPXPXXXXXAPXXXX-PXPXXXXPXXPPXPPXP 878
P P P P P AP P P P PP PP P
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,182,156
Number of Sequences: 27780
Number of extensions: 193896
Number of successful extensions: 1455
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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