Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_O15
         (1130 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   0.018
03_02_0149 + 5933134-5933207,5935039-5935267,5935370-5935468,593...    31   1.3  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    31   2.2  
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866...    24   5.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect(2) = 0.018
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 344 PPPXKKKNXXPPPXKKXXPPP 406
           PPP   K   PPP  K  PPP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPP 356



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 344 PPPXKKKNXXPPPXKKXXPPP 406
           PPP   K   PPP  K  PPP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPP 347



 Score = 28.7 bits (61), Expect = 9.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 344 PPPXKKKNXXPPPXKKXXPPP 406
           PPP  K    PPP K   PPP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPP 348



 Score = 26.6 bits (56), Expect(2) = 0.018
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +2

Query: 77  SFXXPPGXXSPXRXKGXXLFXPXN-SXF*KXPPKPXF*XPXXXXPRKKXPPP 229
           S   PPG  SP R +        + +     PPKP    P    P K  PPP
Sbjct: 287 SLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPP 338


>03_02_0149 +
           5933134-5933207,5935039-5935267,5935370-5935468,
           5935582-5935616,5935694-5935769,5936552-5936662,
           5937001-5937087,5937302-5937395,5937489-5937606,
           5938047-5938542,5939263-5939298,5940047-5940578,
           5940668-5940792
          Length = 703

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 344 PPPXKKKNXXPPPXKKXXPPP 406
           PPP   +N  PPP K   PPP
Sbjct: 543 PPPPPPRNMLPPPPKSMPPPP 563


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 PPPXKKKNXXPPPXKKXXPPPS 409
           PPP  +    PPP KK  PPP+
Sbjct: 367 PPPPPRPPPPPPPIKKGAPPPA 388


>09_04_0745 +
           19884868-19886000,19886110-19886309,19886422-19886666,
           19886880-19887668
          Length = 788

 Score = 24.2 bits (50), Expect(2) = 5.7
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = +2

Query: 731 PPPXPPXPPXXXXXXXXXXXXXXXPXXXPP 820
           PPP PP PP               P   PP
Sbjct: 266 PPPPPPPPPPPMPPRTDNASTQAAPAPPPP 295



 Score = 23.4 bits (48), Expect(2) = 5.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 719 SXXXPPPXPPXPP 757
           S   PPP PP PP
Sbjct: 261 SVRPPPPPPPPPP 273


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,918,076
Number of Sequences: 37544
Number of extensions: 225958
Number of successful extensions: 1582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3421418428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)