Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_O13
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1213 + 31796851-31797429                                         32   0.70 
12_02_0082 - 13372997-13373863,13373928-13374386                       29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
06_03_1190 - 28274801-28275163,28275662-28275853,28275965-282760...    28   8.7  

>04_04_1213 + 31796851-31797429
          Length = 192

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 433 ESGG*RRKEXVSKRPAKGPGTVKRPRCWRXSIGSAPLNEHHXNRRSSQRW 582
           E+ G RR+   S+R A+ PG  +R R W  +  +A  +E     R +  W
Sbjct: 86  ETAGFRRRSLASRRRARAPG--RRKRWWSTTPAAAAADEEERGLRVAAMW 133


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 636 SCALLFPTLPLTGYXSAFXPSGSVXLSPYLTLXVSP 743
           SCALLF  +PL G      PS     S   ++ VSP
Sbjct: 164 SCALLFSPMPLDGPTLGLLPSIDCRYSTKASIPVSP 199


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1190 -
           28274801-28275163,28275662-28275853,28275965-28276088,
           28276177-28276320,28276524-28276640,28277189-28277308,
           28277433-28277521,28277609-28277685,28278250-28278322,
           28278578-28279012,28280247-28280442,28281270-28281490,
           28281591-28281703,28282552-28283146,28283236-28283418,
           28283548-28283712,28283808-28284029
          Length = 1142

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 611 RRFPPGXSLVRXPVPDPAAYRIPVR 685
           R  PP    +   +P PA YR+P+R
Sbjct: 109 RHCPPAHRRLNCLIPPPAGYRVPIR 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,596,981
Number of Sequences: 37544
Number of extensions: 356238
Number of successful extensions: 758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)