Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_O10
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   223   1e-58
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    59   4e-09

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  223 bits (545), Expect = 1e-58
 Identities = 104/155 (67%), Positives = 127/155 (81%)
 Frame = +2

Query: 155 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 334
           MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T 
Sbjct: 1   MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60

Query: 335 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRXXXXXXXXXXXXSLEDVIGIAKIMRNRS 514
           +LT+QNR A+I VVPSAA+LI++ LKEPPRDR            +++ +I IA+IMR RS
Sbjct: 61  KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120

Query: 515 MARYLSXSVKEILGTAXSVGCTVEGRPPHDLIDDI 619
           MA+ L  +VKEILGTA SVGCT++G+ PHD+I+ I
Sbjct: 121 MAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESI 155


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +2

Query: 500 MRNRSMARYLSXSVKEILGTAXSVGCTVEGRPPHDLIDDI 619
           MR RSMA+ L  +VKEILGTA SVGCT++G+ PHD+I+ I
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESI 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,290,506
Number of Sequences: 27780
Number of extensions: 311978
Number of successful extensions: 742
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)