Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_O06
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.52
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.52
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.90
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.90
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin (cae... 29 4.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.4
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.52
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXP-- 667
PP P P P PPP PPP R PPPP P
Sbjct: 278 PPHPMHHPYAMMPP---PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRG 334
Query: 668 -XTPXXXXXXXPNPLXXXLXPXPXXXLXPS 754
P P P P + PS
Sbjct: 335 FMPPPHPMMFRGGPYPPFFPPPPPHFMRPS 364
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.52
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXP-- 667
PP P P P PPP PPP R PPPP P
Sbjct: 278 PPHPMHHPYAMMPP---PFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRG 334
Query: 668 -XTPXXXXXXXPNPLXXXLXPXPXXXLXPS 754
P P P P + PS
Sbjct: 335 FMPPPHPMMFRGGPYPPFFPPPPPHFMRPS 364
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 545 PXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT---PXXXXXXXPNPLXX 715
P PPP + PPP S + PPPP P T P P P
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 326
Query: 716 XLXPXP 733
P P
Sbjct: 327 GSPPPP 332
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXX--PPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXP 667
PP P P P PPP + PPP PPPP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 668 XTP 676
P
Sbjct: 300 PPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 545 PXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT---PXXXXXXXPNPLXX 715
P PPP + PPP S + PPPP P T P P P
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 347
Query: 716 XLXPXP 733
P P
Sbjct: 348 GSPPPP 353
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXX--PPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXP 667
PP P P P PPP + PPP PPPP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 668 XTP 676
P
Sbjct: 321 PPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +2
Query: 545 PXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT---PXXXXXXXPNPLXX 715
P PPP + PPP S + PPPP P T P P P
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 332
Query: 716 XLXPXP 733
P P
Sbjct: 333 GSPPPP 338
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXX--PPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXP 667
PP P P P PPP + PPP PPPP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 668 XTP 676
P
Sbjct: 306 PPP 308
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 497 PXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXTP 676
P P P G P PPP PPP PPP P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXL 652
PP P GG P PPP PPP PPPP +
Sbjct: 742 PPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT 673
PP P P P PP PPP PPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 674 P 676
P
Sbjct: 773 P 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 497 PXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXTP 676
P P P G P PPP PPP PPP P P
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXL 652
PP P GG P PPP PPP PPPP +
Sbjct: 742 PPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT 673
PP P P P PP PPP PPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 674 P 676
P
Sbjct: 773 P 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +2
Query: 497 PXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXTP 676
P P P G P PPP PPP PPP P P
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXL 652
PP P GG P PPP PPP PPPP +
Sbjct: 325 PPPPPPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/61 (26%), Positives = 16/61 (26%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT 673
PP P P P PP PPP PPPP P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 674 P 676
P
Sbjct: 356 P 356
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPP 646
PP P P P PPP PPP +T + P P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTP 118
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 485 LXXPPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPP 643
L PP P P F P PPP PPP S + Q P P
Sbjct: 43 LPCPPPPICPPQFCPPPPMCPPPPPPPPPPM-CPPPPPPMPSYSPCQSYAPAP 94
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPP----XXXXSRTXXQXXXPPPPXLXXX 661
PP P P G PPP + PPP S PPPP
Sbjct: 169 PPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTG 228
Query: 662 XPXTP 676
P P
Sbjct: 229 SPTPP 233
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPP----XXXXSRTXXQXXXPPPPXLXXX 661
PP P P G PPP + PPP S PPPP
Sbjct: 107 PPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Query: 662 XPXTP 676
P P
Sbjct: 167 SPPPP 171
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/83 (26%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPP---XXXXSRTXXQXXXPPPPXLXXXX 664
PP P P PPP S PPP + T PPPP L
Sbjct: 513 PPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNL 572
Query: 665 PXTPXXXXXXXPNPLXXXLXPXP 733
P P P+ P P
Sbjct: 573 SGAP--PPPPPPPPMLGGPPPPP 593
>AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin
(caenorhabditis bacteriocin)protein 6 protein.
Length = 98
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 676 RCXGXXXXKXXXGGGXXLXGGXGGXXXRGWXPXGXXGG 563
R G + GGG G GG RGW G GG
Sbjct: 56 RWGGWGWGRPMWGGGWGRRGWGGGWGRRGWGGYGGYGG 93
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +2
Query: 494 PPXPXXXPXFXXXXGGXPXXXXPPPXXSXXXPPPXXXXSRTXXQXXXPPPPXLXXXXPXT 673
PP P GG P PPP + PPP PPPP P
Sbjct: 67 PPVPNGFIPPPPGPGGIPP---PPPMFAGGIPPPPPMMG-----GIPPPPPMFGAPPPPP 118
Query: 674 PXXXXXXXPNP 706
P P P
Sbjct: 119 PPSGLGVAPQP 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,091,999
Number of Sequences: 27780
Number of extensions: 126893
Number of successful extensions: 604
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -