Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_O05
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 2.3
04_03_0799 - 19805190-19805749,19806316-19806403 30 3.0
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 4.0
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 29 4.0
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 7.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.0
12_02_0969 - 24936399-24936699,24936779-24936949,24937032-249378... 28 9.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 9.3
06_03_0771 + 24473176-24473203,24473292-24474025,24474104-244745... 28 9.3
06_02_0270 - 13613853-13614153,13614233-13614403,13614486-136153... 28 9.3
06_01_1148 + 9629630-9629759,9629848-9630581,9630660-9631121,963... 28 9.3
05_07_0218 + 28470325-28470454,28470543-28471276,28471355-284718... 28 9.3
02_05_0268 - 27302734-27303034,27303114-27303284,27303367-273041... 28 9.3
01_02_0132 + 11444480-11444609,11444698-11445131,11445210-114454... 28 9.3
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 829 PXP*PXXPLPP*HXPPARXHXCPXPPXP 912
P P P P PP PP + + P PP P
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPP 376
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +1
Query: 829 PXP*PXXPLPP*HXPPARX---HXCPXPPXP 912
P P P P PP PP+ H CP PP P
Sbjct: 102 PVPYPAPPPPPACCPPSTHQCYHCCPAPPKP 132
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 826 IPXP*PXXPLPP*HXPPARXHXCPXPPXPTXN 921
+P P P P PP PP P PP P N
Sbjct: 430 LPPPPPPPPPPPPPLPPNMPPPLPPPPEPELN 461
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 788 HP*XLXVXPPHXXSPXHDPXXPYRLNTXPPXXXTXVPXHHXLPTXTPA 931
HP PPH P H P P+ + P P HH P PA
Sbjct: 42 HPHPPHHHPPHHPHPPHHPHPPHHPH---PPHHPHPPHHHPHPHPDPA 86
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 826 IPXP*PXXPLPP*HXPPARXHXCPXPPXP 912
+ P P P PP PP R H P PP P
Sbjct: 67 VTTPTPPPP-PPAPRPPRRHHRIPPPPPP 94
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 829 PXP*PXXPLPP*HXPPARXHXCPXPPXPTXNXTGP 933
P P P P PP PPA P PP P P
Sbjct: 90 PPPPPLLPTPP--PPPASISPTPAPPLPPPPAPAP 122
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 829 PXP*PXXPLPP*HXPPARXHXCPXPPXPTXNXTGP 933
P P P P PP PP P PP P + P
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRP 389
>12_02_0969 -
24936399-24936699,24936779-24936949,24937032-24937852,
24937946-24938407,24938486-24938890
Length = 719
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP PS K S+ A
Sbjct: 372 VKMTPRPSRPTEFTPSKSKLSIEA 395
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 835 P*PXXPLPP*HXPPARXHXCPXPPXPTXNXTGP 933
P P P PP H PP P PT T P
Sbjct: 439 PPPLVPTPPAHAPPVATPPTLATPVPTPPVTAP 471
>06_03_0771 +
24473176-24473203,24473292-24474025,24474104-24474565,
24474647-24475479,24475562-24475732,24475812-24476112
Length = 842
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP+ L P K S+ A
Sbjct: 495 VKMTPRPSRPMELTPPKSKLSIEA 518
>06_02_0270 -
13613853-13614153,13614233-13614403,13614486-13615318,
13615401-13615746,13615940-13616127,13616238-13616408
Length = 669
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP+ L P K S+ A
Sbjct: 322 VKMTPRPSRPMELTPPKSKLSIEA 345
>06_01_1148 +
9629630-9629759,9629848-9630581,9630660-9631121,
9631203-9632035,9632118-9632288,9632368-9632668
Length = 876
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP L P K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552
>05_07_0218 +
28470325-28470454,28470543-28471276,28471355-28471816,
28471898-28472730,28472813-28472983,28473063-28473180
Length = 815
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP L P K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552
>02_05_0268 -
27302734-27303034,27303114-27303284,27303367-27304199,
27304281-27304742,27304821-27305554,27305643-27305772
Length = 876
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP L P K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552
>01_02_0132 +
11444480-11444609,11444698-11445131,11445210-11445431,
11445510-11445971,11446053-11446885,11446968-11447138,
11447218-11447518
Length = 850
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 125 LRLTPRPSRPVVLEPSCLKNSLSA 54
+++TPRPSRP L P K S+ A
Sbjct: 503 VKMTPRPSRPTELTPPKCKLSIEA 526
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,711,504
Number of Sequences: 37544
Number of extensions: 168497
Number of successful extensions: 654
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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