Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N23
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 36 0.061
08_02_1084 - 24232968-24234779 34 0.19
06_03_0905 + 25843547-25844314 32 0.57
04_03_0904 + 20717005-20718087 32 0.75
04_04_1292 - 32413046-32413807,32413901-32413936,32414037-324141... 31 1.00
01_05_0490 + 22672241-22674679 31 1.3
09_03_0042 + 11842263-11842698,11842799-11842896,11843082-118432... 30 3.0
03_06_0297 - 32924162-32924605 30 3.0
08_02_0304 + 15568432-15568455,15569609-15569681,15569824-155699... 29 4.0
09_04_0072 + 14323449-14324274,14324351-14324447,14325175-143252... 29 5.3
10_08_0791 - 20590744-20591211,20591379-20591439,20591525-205915... 28 9.3
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 28 9.3
06_01_0390 + 2802334-2802339,2802461-2802618,2802755-2802826,280... 28 9.3
02_05_0686 - 30900748-30902167,30903442-30904742 23 9.8
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 35.5 bits (78), Expect = 0.061
Identities = 27/83 (32%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPPMGXQQNSFXPXXTYX*MGXRNQKKVVLPPTXXXTPXXTL 876
P P P PN P P P PP N P N VLPP P +L
Sbjct: 588 PPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHS--VLPPPPPPPPPPSL 645
Query: 877 XVRXXPPP-----XXXXPXPPXP 930
R PPP P PP P
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPP 668
Score = 32.3 bits (70), Expect = 0.57
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPPMGXQQNSFXPXXTYX*MGXRNQKKVVLPP---TXXXTPX 867
P P P PN P P PP N P +G + PP + TP
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPT 680
Query: 868 XTLXVRXXPPPXXXXPXPP 924
PPP P PP
Sbjct: 681 GAATSSKGPPPPPPPPLPP 699
>08_02_1084 - 24232968-24234779
Length = 603
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPPMGXQ---QNSFXPXXTYX*MGXRNQKKVVLPPTXXXTPX 867
PS P P + P P PP Q Q+S P Q+KV +P P
Sbjct: 62 PSLPPPLPQKQPPSQQLPPPPQQQQPPPQHSLPPPPPLPQAPPPQQQKVHIPGVAAPAPN 121
Query: 868 XTLXVRXXPPPXXXXPXPP 924
PPP P PP
Sbjct: 122 HPPSQPNLPPPAAPAPLPP 140
>06_03_0905 + 25843547-25844314
Length = 255
Score = 32.3 bits (70), Expect = 0.57
Identities = 24/82 (29%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = +1
Query: 694 IPSPXPXNPNXERPXPXX-PSPPMGXQQNSFXPXXTYX*MGXRNQKKVVLPPTXXXTPXX 870
+P P RP P P+PP+ P TY VV PP TP
Sbjct: 85 VPVTHPPKGPVTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPV 144
Query: 871 TLXVR--XXPPPXXXXPXPPXP 930
T P P P PP P
Sbjct: 145 TYPTPPVTYPTPPTTTPCPPPP 166
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.75
Identities = 22/76 (28%), Positives = 26/76 (34%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPPMGXQQNSFXPXXTYX*MGXRNQKKVVLPPTXXXTPXXTL 876
P+P P E+P P PP + P + K PPT TP T
Sbjct: 35 PTPVKPAPKPEKP-PKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPT- 92
Query: 877 XVRXXPPPXXXXPXPP 924
PPP P PP
Sbjct: 93 -----PPPYTPKPTPP 103
>04_04_1292 -
32413046-32413807,32413901-32413936,32414037-32414179,
32414263-32414419,32414518-32414679,32414860-32415107,
32415589-32415733
Length = 550
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPPMGXQQNSFXP 789
P P P N RP P P PPMG + P
Sbjct: 472 PPPPPQMMNIARPSPSTPQPPMGIMPQTQPP 502
>01_05_0490 + 22672241-22674679
Length = 812
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Frame = +1
Query: 700 SPXPXNPNXERPXPXXPSPPMGXQQNSFXPXXTYX*MGXRNQK-KVVLPPTXXXTPXXTL 876
+P P P RP P P PP N F G ++++ V PP P T
Sbjct: 598 NPAPAPPR--RPPPPPPPPPSSIFYNLFKKG------GSKSRRIHSVAPPQPPPPPPPTT 649
Query: 877 XVRXXPPPXXXXPXPPXP 930
PP P PP P
Sbjct: 650 RRSRKPPQPPSRPAPPPP 667
>09_03_0042 +
11842263-11842698,11842799-11842896,11843082-11843217,
11843349-11843509,11843603-11843753,11843855-11843952,
11844142-11844277,11844404-11844532,11844622-11844720,
11844814-11844909,11845002-11845100,11845201-11845296,
11846394-11846628,11846752-11846873,11846993-11847114,
11847275-11847345,11847940-11848027,11848374-11848439,
11848676-11848795
Length = 852
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = +3
Query: 192 LVASSLXYLTMFTNVYNTGLLITLTNYIGAGSH-SFD-----RTTSFDSIDLEELSEPTT 353
L AS L L + T + TL + + +H ++D R T+FDS++L+ + PT+
Sbjct: 616 LRASVLACLNLETLQPRNSICTTLQSELSGSAHPTYDHQTVMRPTTFDSLELDMVDTPTS 675
Query: 354 TLQPAQQSSE 383
+ A++ S+
Sbjct: 676 DVSNAKEQSQ 685
>03_06_0297 - 32924162-32924605
Length = 147
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 694 IPSPXPXNPNXERPXPXXPSPPM 762
+P P P E+P P PSPPM
Sbjct: 80 MPPPGAPTPGPEQPGPSIPSPPM 102
>08_02_0304 +
15568432-15568455,15569609-15569681,15569824-15569992,
15570224-15570245,15570289-15570342,15570566-15570574
Length = 116
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 107 YQNLECFEFAQDSYNVWRREWLPRYS 30
Y +LE F+FAQ S WR + LPR S
Sbjct: 4 YADLENFQFAQISSKPWRGKTLPRPS 29
>09_04_0072 +
14323449-14324274,14324351-14324447,14325175-14325277,
14325359-14325412,14325495-14325569,14325597-14325650,
14325687-14325755,14325840-14325923,14326115-14326312,
14326428-14326927,14327011-14327140,14328226-14328317,
14328776-14328954,14329114-14329316,14329398-14329499,
14330047-14330209,14330690-14330979,14331088-14331225,
14331311-14331390,14331510-14331606,14331685-14331814,
14331921-14332162
Length = 1301
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 697 PSPXPXNPNXERPXPXXPSPP 759
PSP P NP +P PSPP
Sbjct: 34 PSPSPLNPRATKPPLAVPSPP 54
>10_08_0791 -
20590744-20591211,20591379-20591439,20591525-20591592,
20592015-20592188,20592291-20592331,20592571-20592620,
20593083-20593171,20593250-20593324,20593631-20593719,
20593895-20593955,20594111-20594227,20594465-20594667,
20594785-20594842,20594951-20595103
Length = 568
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 496 PXRLLCSPTTQAMLTSNHAAFITIVIRSTNPTPLRRGDS 380
P RLL PT Q L + A V + PTP R DS
Sbjct: 516 PTRLLIPPTKQRSLDAGRAEVRVDVDSTPTPTPPERHDS 554
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 652 TLTPXQPG-E*XXT*IPSPXPXNPNXE--RPXPXXPSPPMGXQQNS 780
T TP +P T P+P P NPN E P P +PP NS
Sbjct: 154 TPTPTRPAPSPSPTGPPTPSPTNPNLEPSPPPPSSSAPPSRTPSNS 199
>06_01_0390 +
2802334-2802339,2802461-2802618,2802755-2802826,
2802967-2803114,2803234-2803503,2803741-2803904,
2804184-2804236,2804302-2804496,2804597-2804694,
2804787-2804891
Length = 422
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 225 FTNVYNTGLLITLT-NYIGAGSHSFDRTTSFDSIDL 329
F N N+ L I LT NYI A S S T +FD ID+
Sbjct: 85 FANENNSFLAIKLTVNYIIAASSSNIYTKTFDGIDV 120
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +1
Query: 841 PPTXXXTPXXTLXVRXXPPPXXXXPXPPXP 930
PP P PPP P PP P
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +1
Query: 658 TPXQPGE*XXT*IPSPXPXNPNXERPXPXXPSPP 759
+P +P + SP P P +P P PP
Sbjct: 296 SPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPP 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,494,753
Number of Sequences: 37544
Number of extensions: 467756
Number of successful extensions: 1680
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -