Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N19
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.031
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.031
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.031
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.38
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.38
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 25 1.1
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 25 1.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.6
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 30 2.1
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 2.7
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 2.7
AF016428-4|ABR92600.1| 504|Caenorhabditis elegans Hypothetical ... 29 2.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical pr... 28 6.3
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 28 6.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 6.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 6.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 8.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.3
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 24 8.6
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 24 8.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 528 PPPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPP---PXXPXPPXXXXX 698
PPP G PP R P P PPPP P PP
Sbjct: 255 PPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 699 PXXXXPXPXXXXXXPPAGAG 758
P P P PPAG G
Sbjct: 308 PTGSLPPPQAGGSPPPAGTG 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 506 KXXXPPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPX 685
K PP PP PP PP PPPP PP
Sbjct: 228 KRQAPPAGSPPPPP-----PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
Query: 686 XXXXXPXPXPXXXSXXLXPPGXG 754
P P S PP G
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRG 305
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/74 (22%), Positives = 17/74 (22%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXPXXX 710
PP G PP P P PPPPP P
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 711 XPXPXXXXXXPPAG 752
P PP G
Sbjct: 349 PPTGSPPTGRPPRG 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 457 PPXXXXXXXXPPXXXXXKXPPAXXXPPXXXGGGXXPP 567
PP PP PP PP GG PP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 528 PPPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPP---PXXPXPPXXXXX 698
PPP G PP R P P PPPP P PP
Sbjct: 276 PPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 699 PXXXXPXPXXXXXXPPAGAG 758
P P P PPAG G
Sbjct: 329 PTGSLPPPQAGGSPPPAGTG 348
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 506 KXXXPPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPX 685
K PP PP PP PP PPPP PP
Sbjct: 249 KRQAPPAGSPPPPP-----PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
Query: 686 XXXXXPXPXPXXXSXXLXPPGXG 754
P P S PP G
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRG 326
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/74 (22%), Positives = 17/74 (22%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXPXXX 710
PP G PP P P PPPPP P
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 711 XPXPXXXXXXPPAG 752
P PP G
Sbjct: 370 PPTGSPPTGRPPRG 383
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 457 PPXXXXXXXXPPXXXXXKXPPAXXXPPXXXGGGXXPP 567
PP PP PP PP GG PP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +3
Query: 528 PPPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPP---PXXPXPPXXXXX 698
PPP G PP R P P PPPP P PP
Sbjct: 261 PPPPPAAGSPPPP-------RTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 699 PXXXXPXPXXXXXXPPAGAG 758
P P P PPAG G
Sbjct: 314 PTGSLPPPQAGGSPPPAGTG 333
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +2
Query: 506 KXXXPPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPX 685
K PP PP PP PP PPPP PP
Sbjct: 234 KRQAPPAGSPPPPP-----PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
Query: 686 XXXXXPXPXPXXXSXXLXPPGXG 754
P P S PP G
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRG 311
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/74 (22%), Positives = 17/74 (22%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXPXXX 710
PP G PP P P PPPPP P
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 711 XPXPXXXXXXPPAG 752
P PP G
Sbjct: 355 PPTGSPPTGRPPRG 368
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 457 PPXXXXXXXXPPXXXXXKXPPAXXXPPXXXGGGXXPP 567
PP PP PP PP GG PP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 700 GXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXXGG--XXPPPXXXGGG 527
G GG G GGGGG G G G GG PPP GGG
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGGGG G G A
Sbjct: 67 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 127 GGCGGGCGGGGGG 139
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 176
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 138 GGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 757 PAPAGGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
P P G G G GG G GGGGG G G
Sbjct: 112 PPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXG 641
GG G G G GG G GGGGG G
Sbjct: 124 GGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGG 158
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 561 PPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPP 683
PP + A P P P PPPPP P PP
Sbjct: 328 PPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPP 368
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 627 PXXXXPXXPPPPPXXPXPPXXXXXP 701
P P PPPPP P PP P
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQTP 373
Score = 23.8 bits (49), Expect(2) = 7.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 302 PPPPPPP 322
PPPPPPP
Sbjct: 357 PPPPPPP 363
Score = 22.6 bits (46), Expect(2) = 7.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 293 FXXPPPPPP 319
F PPPPPP
Sbjct: 321 FILPPPPPP 329
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/87 (22%), Positives = 20/87 (22%)
Frame = +2
Query: 455 PPPXXXXXXXXXXXXXXKXXXPPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXX 634
PPP PP P GG PP PP
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 635 XXXXXXPPPPXXXXPPXXXXXXPXPXP 715
PPP PP P P P
Sbjct: 360 PGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = +2
Query: 518 PPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXX 697
PP P PP PP PPPP PP
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 698 XPXPXPXXXSXXLXPP 745
P P P PP
Sbjct: 334 PPPPPPGMRYPGGMPP 349
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 3/68 (4%)
Frame = +3
Query: 528 PPPXXXGG---GXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXX 698
PPP G G PP P P PPPPP P P
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379
Query: 699 PXXXXPXP 722
P P
Sbjct: 380 MIPPPPPP 387
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 757 PAPAGGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXG 641
PAP GG G G G GG G GGGGG G
Sbjct: 76 PAPCGGGCGG--GGGGCGGGGGGCGGGGGCGGGGGGCGG 112
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGGGG G G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 158 GGGGGCGGGGGGG 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGGGG G G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGG-GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 167 GGGGCGGGSSGGG 179
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGG G G G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 565 GGXXPPPXXXGG 530
GG P GG
Sbjct: 179 GGYAVAPSGGGG 190
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 757 PAPAGGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXG 641
PAP GG G G G GG G GGGGG G
Sbjct: 76 PAPCGGGCGG--GGGGCGGGGGGCGGGGGCGGGGGGCGG 112
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGGGG G G G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGG 157
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 158 GGGGGCGGGGGGG 170
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGG 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGGGG G G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGG-GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 167 GGGGCGGGSSGGG 179
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G GGG G G G
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Query: 565 GGXXPPPXXXGG 530
GG P GG
Sbjct: 179 GGYAVAPSGGGG 190
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/87 (22%), Positives = 20/87 (22%)
Frame = +2
Query: 455 PPPXXXXXXXXXXXXXXKXXXPPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXX 634
PPP PP P GG PP PP
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 635 XXXXXXPPPPXXXXPPXXXXXXPXPXP 715
PPP PP P P P
Sbjct: 370 PGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/76 (23%), Positives = 18/76 (23%)
Frame = +2
Query: 518 PPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXX 697
PP P PP PP PPPP PP
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 698 XPXPXPXXXSXXLXPP 745
P P P PP
Sbjct: 344 PPPPPPGMRYPGGMPP 359
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 3/68 (4%)
Frame = +3
Query: 528 PPPXXXGG---GXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXX 698
PPP G G PP P P PPPPP P P
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 389
Query: 699 PXXXXPXP 722
P P
Sbjct: 390 MIPPPPPP 397
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 651 PPPPPXXPXPPXXXXXPXXXXPXPXXXXXXPPAG 752
PPPPP P PP P P P P G
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTG 1371
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 280 KILXFXXPPPPPPP 321
++ + PPPPPPP
Sbjct: 340 QVYHYAPPPPPPPP 353
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 301 PPPPPPPXKKXXG 339
PPPPPPP G
Sbjct: 346 PPPPPPPPHPQQG 358
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 304 PPPPPPXKKXXGG 342
PPPPPP +K G
Sbjct: 180 PPPPPPHRKQENG 192
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 301 PPPPPPP 321
PPPPPPP
Sbjct: 134 PPPPPPP 140
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGG 130
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 99 GGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASG 138
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G G GG G GGGGG G G
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 518 PPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXX 697
PP PP GG PP PP PPPP PP
Sbjct: 715 PPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPGGCP 769
Query: 698 XPXPXPXXXSXXLXPP 745
P P P PP
Sbjct: 770 PPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +2
Query: 551 GXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXXXPXPXPXXXSX 730
G PP PP PPPP P P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 731 XLXPPGXGG 757
PP GG
Sbjct: 771 PPPPPPPGG 779
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXP 701
PP G PP P P PPPPP PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 518 PPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXX 697
PP PP GG PP PP PPPP PP
Sbjct: 715 PPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPGGCP 769
Query: 698 XPXPXPXXXSXXLXPP 745
P P P PP
Sbjct: 770 PPPPPPPPGGFKGGPP 785
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +2
Query: 551 GXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXXXPXPXPXXXSX 730
G PP PP PPPP P P P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 731 XLXPPGXGG 757
PP GG
Sbjct: 771 PPPPPPPGG 779
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXP 701
PP G PP P P PPPPP PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +2
Query: 518 PPXXXPPXXXGGXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXX 697
PP PP GG PP PP PPPP PP
Sbjct: 298 PPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP----PPPGGCP 352
Query: 698 XPXPXPXXXSXXLXPP 745
P P P PP
Sbjct: 353 PPPPPPPPGGFKGGPP 368
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +2
Query: 551 GXXXPPXXXXXXXXXXXPPXXXXXXXXXXXXXXXPPPPXXXXPPXXXXXXPXPXPXXXSX 730
G PP PP PPPP P P P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 731 XLXPPGXGG 757
PP GG
Sbjct: 354 PPPPPPPGG 362
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 531 PPXXXGGGXXPPXXXXXXXRXAXXPXXXXXXXPXXXXPXXPPPPPXXPXPPXXXXXP 701
PP G PP P P PPPPP PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 301 PPPPPPPXKKXXGGKXRGG 357
PPPPPPP GG R G
Sbjct: 154 PPPPPPPLMGGSGGHWRSG 172
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 301 PPPPPPPXKKXXGGKXRGG 357
PPPPPPP G GG
Sbjct: 535 PPPPPPPRSSGANGNRNGG 553
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 302 PPPPPPPXKXGXGXKXGGG 358
PPPPPP G + GGG
Sbjct: 536 PPPPPPRSSGANGNRNGGG 554
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 627 PXXXXPXXPPPPPXXPXPPXXXXXP 701
P P PPPPP P PP P
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPP 151
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 627 PXXXXPXXPPPPPXXPXPP 683
P P PPPPP P PP
Sbjct: 134 PPPPPPHYPPPPPHYPPPP 152
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 301 PPPPPPPXKKXXGG 342
PPPPPPP K GG
Sbjct: 122 PPPPPPPRKSRAGG 135
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 627 PXXXXPXXPPPPPXXPXPPXXXXXPXXXXPXPXXXXXXP 743
P P PPPP P PP P P P P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = +3
Query: 642 PXXPPP---PPXXPXPPXXXXXPXXXXPXPXXXXXXPP 746
P PPP PP P PP P P P PP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 302 PPPPPPPXKXGXGXK 346
PPPPPPP + G G K
Sbjct: 66 PPPPPPPPQCGCGRK 80
>AF016428-4|ABR92600.1| 504|Caenorhabditis elegans Hypothetical
protein T05C3.6a protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 97 CLEYFMKNGMXLXWNRGAPGGNYP 168
CL +KN + + WN GAPG P
Sbjct: 238 CLANDLKNLLEIYWNMGAPGATIP 261
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXGXXXXXXXGXXAXRXXXXXXX 566
GG G G G GG G G GGG G G G
Sbjct: 177 GGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPG 236
Query: 565 GGXXPPPXXXGGG 527
GG GGG
Sbjct: 237 GGYGMGGGGGGGG 249
>Z81540-5|CAB04405.2| 946|Caenorhabditis elegans Hypothetical
protein F46B3.5 protein.
Length = 946
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 356 PPRXXPPXXFXXGGGGGGG 300
PP P F GGGGGGG
Sbjct: 723 PPPVAPAVAFAGGGGGGGG 741
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 642 PXXPPPPPXXPXPPXXXXXP 701
P PPPPP P PP P
Sbjct: 47 PFAPPPPPSPPLPPKCECPP 66
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 642 PXXPPPPPXXPXPPXXXXXP 701
P PPPPP P PP P
Sbjct: 3 PPPPPPPPPPPPPPPAASAP 22
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 642 PXXPPPPPXXPXPPXXXXXP 701
P PPPPP P PP P
Sbjct: 4 PPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 642 PXXPPPPPXXPXPPXXXXXP 701
P PPPPP P PP P
Sbjct: 3 PPPPPPPPPPPPPPPAASAP 22
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 642 PXXPPPPPXXPXPPXXXXXP 701
P PPPPP P PP P
Sbjct: 4 PPPPPPPPPPPPPPAASAPP 23
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 651 PPPPPXXPXPPXXXXXPXXXXPXPXXXXXXPPAGAG 758
PPPPP PP P P PP+GAG
Sbjct: 630 PPPPP----PPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 651 PPPPPXXPXPPXXXXXPXXXXPXPXXXXXXPPAGAG 758
PPPPP PP P P PP+GAG
Sbjct: 456 PPPPP----PPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGGXXGXXXXG 626
GG G G GG G GGGGG G G
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 745 GGXXXXXXGXGXXXXGXXXXXGGXGXXGGGGG 650
GG G G G GG G GGGGG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGG 85
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 24.2 bits (50), Expect(2) = 8.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 292 FXXPPPPPPP 321
+ PPPPPPP
Sbjct: 1075 YALPPPPPPP 1084
Score = 21.8 bits (44), Expect(2) = 8.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 301 PPPPPPPXKK 330
PPPPP P ++
Sbjct: 1080 PPPPPAPPRR 1089
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 24.2 bits (50), Expect(2) = 8.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 292 FXXPPPPPPP 321
+ PPPPPPP
Sbjct: 1074 YALPPPPPPP 1083
Score = 21.8 bits (44), Expect(2) = 8.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 301 PPPPPPPXKK 330
PPPPP P ++
Sbjct: 1079 PPPPPAPPRR 1088
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,796,318
Number of Sequences: 27780
Number of extensions: 221464
Number of successful extensions: 4977
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2581
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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