Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N17
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.95
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.7
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 26 6.7
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 6.7
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 6.7
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 26 8.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/75 (26%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Frame = +1
Query: 721 PXXPKYP*CLNPRDXKYGXSPXXXAPPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPX 900
P PK P +P P P P T PP P S P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 901 XXXXXPXP-XXPPTP 942
P P PP P
Sbjct: 1072 EIPSIPAPSGAPPVP 1086
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/97 (23%), Positives = 28/97 (28%)
Frame = +1
Query: 652 SMGVPKFDHPTGPXDRDXLPXXXPXXPKYP*CLNPRDXKYGXSPXXXAPPXXXPXPRXTX 831
S+ P P+ P P PK P G P P P +
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 832 PPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPPTP 942
PP P S P+P+ P P PP P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIP--PVPKPAAGVPPVP 1192
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSP--XXHXXPSPTXXQPXXXXXXPXPXXPPTP 942
PP P PR + PPP P +P P P+ P P P P
Sbjct: 139 PPTSAP-PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +1
Query: 778 SPXXXAPPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPPTP 942
SP P P P P P P +P P P P P P PP P
Sbjct: 731 SPPPPPPAVIVPTPAPA-PIPVPPPAPIM-GGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXPXPXXPP 936
PP P PPP P H P P +P P P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = +1
Query: 796 PPXXXPXPRXTXPPPXPXCSPXXHXXPSPTXXQPXXXXXXP 918
PP P PPP P H P P +P P
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 464 RFQGTSSIRTSKILISRRIQSQLSLLTIG*KKIPI 568
RFQ T SIRT I +QL + +IG K +P+
Sbjct: 308 RFQITDSIRTDAESKFTTIPAQLFIRSIGYKSMPL 342
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 592 PDSLXSATXXVLVNXIXFXGSMGVPKFDHPTGPXD 696
P+S+ ++ + F S+ +P F+ P+GP D
Sbjct: 307 PESIPEGYEIDKLDWMSFSESLNLPTFNQPSGPSD 341
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 141 NLSNVLKNGNDNFTARMFTEVVKNNPGXKHCPLGI 245
N N+LK ND AR +TE V K P GI
Sbjct: 56 NSQNLLKQLNDEMKARKYTETVATFSSLK--PFGI 88
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 68 DAGHKHEDNHLFVYYRHRGNGSRHKSL*CAQKW 166
D K E +F YY R GS + CA W
Sbjct: 653 DMSWKKEVRRIFQYYTDRTQGSSIEEKRCAMTW 685
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,057,146
Number of Sequences: 5004
Number of extensions: 56589
Number of successful extensions: 198
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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