Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N16
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 9e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.18
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.23
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 0.28
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.30
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.69
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 28 2.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 2.8
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 3.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 6.4
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 9e-05
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +1
Query: 385 PAPTXXXGGGXPPPPXXAXXXXXPPPPPXPPP 480
P P GG PPPP PPPPP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 41.1 bits (92), Expect = 2e-04
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPP-PXXPPXXXKX-KXXXPXRGGVXXXSXXPPPPPPP 563
PPPPP P P P P PP P GV PPPPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGPPPPPXXLXPXXTPPPP 466
P P PP G GPPPPP PPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPP--------PPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGPPPPPXXLXPXXTPPPPP 469
PP G PP G PPPP PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPP--------PPPPP 783
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 418 PPPPXXAXXXXXPPPPPXPPP 480
PPPP A P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP 752
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 69 PXPPPPPP 92
P PPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 23.0 bits (47), Expect(2) = 1.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 39 PXXXPXXXXXPXPPPPP 89
P P P PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 416 PPPPPXXLXPXXTPPPPPXPPXXXXXKXXPPXXGGGL 526
PPPPP P PPPPP P K P G L
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGNL 47
Score = 33.5 bits (73), Expect = 0.042
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 406 GGGXPPPPXXAXXXXXPPPPPXPPPXXXXKKXXXPXGGGS 525
G PPPP PPPP PP +K P G+
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGN 46
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 443 PXXTPPPPPXPPXXXXXKXXPP 508
P PPPPP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 543 PPPPPPPXXXHPP 581
PPPPPPP PP
Sbjct: 9 PPPPPPPPGFEPP 21
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 437 LXPXXTPPPPPXPPXXXXXKXXPPXXGG 520
L P PPPPP P + PP G
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.003
Identities = 28/118 (23%), Positives = 30/118 (25%)
Frame = +3
Query: 228 PPPKKXGAXXPPXNFSPGKXFFXPXPPXXXXXXWGGILXTXXPPXSSPGGKKTXXHXIXX 407
PPP + PP P PP G I PP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI---PLPPQGRSAPPPPPPRSAPS 371
Query: 408 GGXPPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHPP 581
G PPP PP P P + P G S P P PP P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPP-PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 456 PPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPP 560
PPPP PP + + P G S PPPPPP
Sbjct: 311 PPPP--PPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGPPPPPXXLXPXXTPPPP 466
PPP + PP PPPPP PPP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPP--PPPPPXXXHPP 581
PP P P P P PP P G+ PP P PPP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.52
Identities = 27/102 (26%), Positives = 31/102 (30%)
Frame = +3
Query: 258 PPXNFSPGKXFFXPXPPXXXXXXWGGILXTXXPPXSSPGGKKTXXHXIXXGGXPPPPPXX 437
PP N + P P I T PP P + + PPPPP
Sbjct: 258 PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP-- 315
Query: 438 XXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPP 563
PP + P G S PPPPPPP
Sbjct: 316 -----PP---------SRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.69
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGPPPPPXXLXPXXTPPPPP 469
PPP S + P PPPPP P PPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHPP 581
PP P P PP P P P + PP PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/83 (25%), Positives = 24/83 (28%)
Frame = +3
Query: 330 GGILXTXXPPXSSPGGKKTXXHXIXXGGXPPPPPXXXXPXXPPPPPXXPPXXXKXKXXXP 509
G T PP +P PP P P PP PP P P
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA-PAAPPLPPSAP-IAPPLPAGMP 464
Query: 510 XRGGVXXXSXXPPPPPPPXXXHP 578
+ + PPP P P P
Sbjct: 465 AAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 385 PAPTXXXGGGXPPPPXXAXXXXXPPPPPXP 474
P P G PP + PPPPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 392 PPXXXGGGPPPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP PP + P PPP PP PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP 268
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 70 PXPPPPPPRXXXDXPXRGN 126
P PPPPP R P GN
Sbjct: 311 PPPPPPPSRRNRGKPPIGN 329
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 392 PPXXXGGGPPPPPXXLXPXXTPPPPPXPP 478
PP PPPPP + P + PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPP 479
PPPP P PP P PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 4/43 (9%)
Frame = +2
Query: 392 PPXXXGGGPPP----PPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP PP P P PPPP PP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 392 PPXXXGGGPPPPPXXLXPXXTPPPPPXP 475
PP PPPP P P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.30
Identities = 23/61 (37%), Positives = 23/61 (37%)
Frame = -2
Query: 560 GGGGGGXXXXXXDPPPXGXXXFXFXXXGGGXGGGGGXXXXXAXXGGGGXPPPXNXVGAGF 381
GGG GG PPP G F GG GG GG GG G P G G
Sbjct: 187 GGGFGGFGGGSGGPPP-GPGGF------GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 380 F 378
F
Sbjct: 240 F 240
Score = 29.5 bits (63), Expect = 0.69
Identities = 26/68 (38%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Frame = -2
Query: 563 GGGGGG-GXXXXXXDPPPXGXXXF-XFXXXG---GGXGG-GGGXXXXXAXXGGGGXPPPX 402
GGG GG G P P G F F G GG GG GGG GG G P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 401 NXVGAGFF 378
G G F
Sbjct: 247 FGGGLGGF 254
Score = 27.9 bits (59), Expect = 2.1
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -1
Query: 522 PPPXXGGXFFXXXXXGGXGGGGGVXXGXSXXGGGGGPPPXXXGGXXFFSPXEKXGGGXXX 343
PPP GG GG GG G G G GGGP G F GGG
Sbjct: 200 PPPGPGGF----GGFGGFGGEGHHHGGHG--GFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 342 LKFPPXKXXXXXGG 301
P GG
Sbjct: 254 FGGGPGGFGGGPGG 267
Score = 27.9 bits (59), Expect(2) = 0.18
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 563 GGGGGGGXXXXXXDPPPXGXXXFXFXXXGGGXGGGGGXXXXXAXXGGGGXP 411
GG GG G + P G GG G GGG GG G P
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 22.2 bits (45), Expect(2) = 0.18
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 716 GGGXGGXGXGGG 681
GGG GG G G G
Sbjct: 187 GGGFGGFGGGSG 198
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +3
Query: 453 PPPPPXXPPXXXKX-KXXXPXRGGVXXXSXXPPPPPPPXXXHPP 581
PPPPP PP + P R S PPPP PP
Sbjct: 240 PPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 456 PPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPP 563
PPP PP P + PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPS-----DYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 392 PPXXXGGGPPPPPXXLXPXXTPPPPPXPP 478
PP P L PPPPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 454 PPPPPXPPP 480
PPPPP PPP
Sbjct: 189 PPPPPPPPP 197
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/29 (34%), Positives = 11/29 (37%)
Frame = +1
Query: 52 PXXXXXPXPPPPPPRXXXDXPXRGNP*DF 138
P P PPPPPP P D+
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDY 212
Score = 23.8 bits (49), Expect(2) = 0.96
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 75 PPPPPPTXXXRXT 113
PPPPPPT + T
Sbjct: 239 PPPPPPTLPPQST 251
Score = 23.4 bits (48), Expect(2) = 0.96
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 69 PXPPPPPP 92
P PPPPPP
Sbjct: 236 PAPPPPPP 243
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 454 PPPPPXPPP 480
PPPPP PPP
Sbjct: 306 PPPPPPPPP 314
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 495 KXXXPXRGGVXXXSXXPPPPPPP 563
K P G PPPPPPP
Sbjct: 291 KTQAPSSGDSANGGLPPPPPPPP 313
Score = 24.6 bits (51), Expect(2) = 0.28
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 385 PAPTXXXGGGXPPPPXXAXXXXXPPPPP 468
P+ GG PPPP PPPPP
Sbjct: 295 PSSGDSANGGLPPPP--------PPPPP 314
Score = 24.6 bits (51), Expect(2) = 0.28
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 454 PPPPPXPPPXXXXKKXXXP 510
PPPPP PP K P
Sbjct: 307 PPPPPPPPSNDFWKDSNEP 325
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 210 PPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 223 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 236 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 262 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 275 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 PPPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
PP GE PP G PPPP P PPPP PP
Sbjct: 288 PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Frame = +2
Query: 356 PPFFSXGEKNXXPPXXXGGGP--PPPPXXLXPXXTPPPPPXPPXXXXXKXXPP 508
P GE PP G PPPP P PPPP PP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHPP 581
P P P PP P PP P + S PP P PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/55 (25%), Positives = 16/55 (29%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHPP 581
PPP P P PP + P + S PP P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 417 PPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPP 563
P PPP P P GV PPPPPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 454 PPPPPXPPP 480
PPPPP PPP
Sbjct: 945 PPPPPPPPP 953
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/70 (24%), Positives = 20/70 (28%)
Frame = +3
Query: 354 PPXSSPGGKKTXXHXIXXGGXPPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXX 533
PP +P G P P P P P P PP + + V
Sbjct: 1150 PPVPAPSGAPPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 534 SXXPPPPPPP 563
PP PP
Sbjct: 1209 PVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Frame = +2
Query: 356 PPFFSXGEKNXXPPXXXGGGPPPPPXXLXPXXTP----PPPPXP 475
PP E P G P PPP P TP PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 4.8
Identities = 27/119 (22%), Positives = 27/119 (22%)
Frame = +3
Query: 222 GXPPPKKXGAXXPPXNFSPGKXFFXPXPPXXXXXXWGGILXTXXPPXSSPGGKKTXXHXI 401
G PP K PP P P P PP P G
Sbjct: 1090 GIPPVPKPSVAAPPV---PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 402 XXGGXPPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHP 578
PP P P P P PP P PPP P P
Sbjct: 1147 VAA--PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +1
Query: 355 PPXLLXGGKKPAPTXXXGGGXPPPPXXAXXXXXP--PPPPXPPP 480
PP + P P G PPP A P P P PP
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 411 GXPPPPPXXXXPXXPPPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPPXXXHP 578
G PP P P P P PP P V S PP P P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP----VPAPSGAPPVPKPSVAAPP 1132
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 411 GXPPPPPXXXXPXXPPPPPXXPP 479
G PP PP P P P PP
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPP 1228
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 495 KXXXPXRGGVXXXSXXPPPPPPP 563
K P V S PPPPPPP
Sbjct: 1079 KPSAPVANNVSKPSAVPPPPPPP 1101
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 457 PPPPXPPPXXXXKK 498
PPPP PPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 456 PPPPXXPPXXXKXKXXXPXRGGVXXXSXXPPPPPPP 563
PP P P R S PPPPPPP
Sbjct: 341 PPAPFFPLGFSPHLNDESSRSRWSNISYSPPPPPPP 376
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 534 SXXPPPPPPPXXXHPP 581
S PPPPPP H P
Sbjct: 369 SPPPPPPPPELLNHSP 384
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +2
Query: 374 GEKNXXPPXXXGGGPPPPPXXLXPXXTPPPPPXPPXXXXXKXXPPXXGG 520
G + P G PPPPP P P P P P G
Sbjct: 342 GNQVMPTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNPFLQPTFSG 390
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 6.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 546 PPPPPPXXXHPP 581
PPPPPP +PP
Sbjct: 206 PPPPPPQQNYPP 217
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +1
Query: 358 PXLLXGGKKPAPTXXXGGGXPPPPXXAXXXXXPPPPP 468
P + PAPT PPPP + PP P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 477 GGXGGGGGVXXGXSXXGGGGGPPPXXXGG 391
GG GG G G S G GGG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,917,399
Number of Sequences: 5004
Number of extensions: 41291
Number of successful extensions: 749
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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