Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N15
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.014
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.024
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.26
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.39
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.69
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.91
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 28 1.6
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 28 1.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 2.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.5
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.014
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 607 GXPPPPXPXP--PPPXXXPPPPP 669
G PPPP P P PP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 32.3 bits (70), Expect = 0.097
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 604 GGXPPPPXPXPPPPXXXPPPPP 669
G PPPP P P PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXRPXPXXXXK 702
PP P PPPP PP P P K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 813 LPPXXPXXPPXPXXXPXPPXXXXXPPP 893
LPP P PP P P PPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXPPPPP 900
PPPPP P P PPPPP
Sbjct: 11 PPPPPPGFEPPSQP-----PPPPP 29
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXPPPPPXP 906
PPPPP P PPPPP P
Sbjct: 9 PPPPPPPPGFEPP----SQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.024
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 607 GXPPPPXPXPPPPXXXPPPPPXXRP 681
G PPPP P P PPPPP P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 6/28 (21%)
Frame = +1
Query: 604 GGXPPPPXP------XPPPPXXXPPPPP 669
GG PPPP P PPPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPP---PPPPP 783
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXPPPPPXP 906
PPPPP PP PPPPP P
Sbjct: 763 PPPPPPGVAGAGPP-----PPPPPPP 783
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXPPPPPXP 906
P P P P P PPPPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +1
Query: 829 PPPPPXXXXXPXP-PXXXXXPPPPP 900
PPPPP P P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +1
Query: 616 PPPXPXPPP-PXXXPPPPPXXRP 681
P P P PPP P PPPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Frame = +1
Query: 829 PPPPPXXXXXPXPP----XXXXXPPPPPXP 906
PPP P P PP PPPPP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXRPXP 687
PPPP P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPP 669
PP P PPP PPPPP
Sbjct: 753 PPAPIMGGPPP---PPPPP 768
Score = 21.8 bits (44), Expect(2) = 9.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 507 VGXPPPXXPPTG 542
+G PPP PP G
Sbjct: 758 MGGPPPPPPPPG 769
Score = 21.8 bits (44), Expect(2) = 9.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 654 PPPPPXPXA 680
PPPPP P A
Sbjct: 776 PPPPPPPPA 784
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXRPXP 687
P P PPPP PPPP P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Frame = +1
Query: 616 PPPXPX--PPPPXXXPPP--PPXXRPXP 687
PPP P PPPP P P PP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 6/32 (18%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXP------PPPPXP 906
P PPP P PP P PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +1
Query: 613 PPPPXPXPPP--PXXXPPPP 666
PPPP P P P PPPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 654 PPPPPXPXAPPXXT 695
PPPPP P PP T
Sbjct: 238 PPPPPPPTLPPQST 251
Score = 26.2 bits (55), Expect(2) = 0.26
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 616 PPPXPXPPPPXXXPP 660
P P P PPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 23.0 bits (47), Expect(2) = 0.26
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 613 PPPPXPXPP 639
PPPP P PP
Sbjct: 189 PPPPPPPPP 197
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +1
Query: 829 PPPPPXXXXX---PXPPXXXXXPPPPP 900
PPPPP P PP PPPPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 813 LPPXXPXXPPXPXXXP-XPPXXXXXPPPXPS 902
LPP P PP P P PP P P P+
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Frame = +1
Query: 829 PPPPPXXXXXPXPP-----XXXXXPPPPPXP 906
PPPPP PP PPPPP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 813 LPPXXPXXPPXPXXXPXPPXXXXXPPPXP 899
LP P PP P P PP P P
Sbjct: 459 LPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 616 PPPXPXPPPPXXXPPPPPXXRPXP 687
P P P PPP PP P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 455 PPXKKXAXXSLXXKXGRXXXPPPXFXPNRGQXP 553
PP + + +L R PPP NRG+ P
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPP 666
PPPP P P PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPP 378
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 0.69
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXR 678
P PP P P P PPPP R
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVR 750
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 892 GGGXXXXXGGXGXXXGXGGXXGXXGGR 812
GGG GG G G GG G GGR
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGR 472
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.91
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPP 666
PPPP P P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXRPXP 687
PP P PP P PP P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 619 PPXPXPPPPXXXPPPPPXXRPXP 687
PP PP P PP P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIP 161
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 616 PPPXPXPPPPXXXPPPPP 669
PPP P P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +1
Query: 604 GGXPPPPXPXPPPPXXXP--PPPPXXRPXP 687
G PPPP P P P P P P P P
Sbjct: 353 GSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 613 PPPPXPXPPPPXXXPPPPPXXRPXP 687
P P P P PP P P RP P
Sbjct: 325 PAAPVPTPAPPVKTSPHPASYRPQP 349
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 604 GGXPPPPXPXPP 639
GG PPPP P PP
Sbjct: 303 GGLPPPPPPPPP 314
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 829 PPPPPXXXXXPXPPXXXXXPPPPP 900
PP PP P P PP PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPP 1212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,934,503
Number of Sequences: 5004
Number of extensions: 26996
Number of successful extensions: 475
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -