Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N12
(1008 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 103 2e-22
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 99 2e-21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.3
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 24 2.6
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 24 5.9
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 24 5.9
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 24 5.9
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 24 5.9
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 6.9
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 29 6.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.9
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 29 6.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.9
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.9
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 9.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 9.2
U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical pr... 28 9.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 9.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 9.2
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 103 bits (247), Expect = 2e-22
Identities = 46/65 (70%), Positives = 58/65 (89%)
Frame = +1
Query: 133 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 312
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EPYWPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60
Query: 313 TNIGS 327
T++ S
Sbjct: 61 TSVSS 65
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 99 bits (238), Expect = 2e-21
Identities = 45/65 (69%), Positives = 57/65 (87%)
Frame = +1
Query: 133 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 312
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP WPGLFAKALEG++V++LI
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPNWPGLFAKALEGVDVKNLI 60
Query: 313 TNIGS 327
T++ S
Sbjct: 61 TSVSS 65
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 446 P*PXASXSL*XXXPPXXPTPXXPPXPPPXPPXSXRHXP 559
P P S+ PP PTP P PPP PP S P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPP-PPSSGMWPP 298
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 446 P*PXASXSL*XXXPPXXPTPXXPPXPPPXPPXSXRHXP 559
P P S+ PP PTP P PPP PP S P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPP-PPSSGMWPP 308
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXGG 484
G G C GG GGG GG G G GG
Sbjct: 157 GGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 558 GXCRXXXGGWGGGXGGXXGVGXXGG 484
G C GG GGG GG G G GG
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGCGG 87
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 558 GXCRXXXGGWGGGXGGXXGVGXXGG 484
G C GG GGG GG G G GG
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGG 107
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 558 GXCRXXXGGWGGGXGGXXGVGXXGG 484
G C GG GGG GG G G GG
Sbjct: 120 GGCGGGGGGCGGGCGGGGGGGCGGG 144
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXG 487
G G C GG GGG GG G G G
Sbjct: 150 GGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXGG 484
G G C GG GGG GG G G GG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 558 GXCRXXXGGWGGGXGGXXGVGXXGG 484
G C GG GGG GG G G GG
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXG 487
G G C GG GGG GG G G G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXGG 484
G G C GG GGG GG G G GG
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGG 146
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 558 GXCRXXXGGWGGGXGGXXGVGXXGG 484
G C GG GGG GG G G GG
Sbjct: 81 GGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 570 GXRRGXCRXXXGGWGGGXGGXXGVGXXG 487
G G C GG GGG GG G G G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGGXXXQ 472
GGWGG GG G G GG Q
Sbjct: 146 GGWGGSQGGQNGGGGRGGSGGQ 167
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXS 544
PP P P PP PPP P S
Sbjct: 66 PPPPPPPMCPPPPPPMPSYS 85
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P PP PP PP
Sbjct: 59 PPMCPPPPPPPPPPMCPP 76
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P P PPP PP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXSXRHXP 559
PP P PP PPP PP + P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P P PPP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXSXRHXP 559
PP P PP PPP PP + P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P P PPP PP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXSXRHXP 559
PP P PP PPP PP + P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P P PPP PP
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP PTP PP PPP PP
Sbjct: 134 PP--PTPAAPPPPPPPPP 149
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 497 PTPXXPPXPPPXPP 538
P PP PPP PP
Sbjct: 355 PQSLVPPPPPPPPP 368
Score = 24.2 bits (50), Expect(2) = 2.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 512 PPXPPPXPPXS 544
PP PPP PP S
Sbjct: 361 PPPPPPPPPPS 371
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 446 P*PXASXSL*XXXPPXXPTPXXPPXPPPXPPXSXRHXP 559
P P A+ PP P PP PPP PP P
Sbjct: 336 PQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTP 373
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 452 PXASXSL*XXXPPXXP-TPXXPPXPPPXPPXSXRHXPLLXP 571
P ++ S+ PP P + PP PPP PP H P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAP 827
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 452 PXASXSL*XXXPPXXP-TPXXPPXPPPXPPXSXRHXPLLXP 571
P ++ S+ PP P + PP PPP PP H P
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPPPPPPGGLMHVAASAP 827
>Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical
protein C01G10.7 protein.
Length = 324
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 121 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPY 258
S KM+ K + S ++ ++D VA+T + + + AAA+D PY
Sbjct: 34 SNQKMLDKVPMMQADSVVLELEDGVALTAKADARVRAAAALDKLPY 79
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 512 PPXPPPXPPXSXRHXP 559
PP PPP PP P
Sbjct: 266 PPPPPPPPPKPVSREP 281
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXP 535
PP + PP PPP P
Sbjct: 258 PPREKSVPPPPPPPPPP 274
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 512 PPXPPPXPPXSXRHXP 559
PP PPP PP P
Sbjct: 266 PPPPPPPPPKPVSREP 281
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXP 535
PP + PP PPP P
Sbjct: 258 PPREKSVPPPPPPPPPP 274
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 512 PPXPPPXPPXSXRHXP 559
PP PPP PP P
Sbjct: 251 PPPPPPPPPKPVSREP 266
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXP 535
PP + PP PPP P
Sbjct: 243 PPREKSVPPPPPPPPPP 259
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 512 PPXPPPXPPXSXRHXP 559
PP PPP PP P
Sbjct: 251 PPPPPPPPPKPVSREP 266
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXP 535
PP + PP PPP P
Sbjct: 243 PPREKSVPPPPPPPPPP 259
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GGWGGG GG G G GG
Sbjct: 275 GGWGGGYGG-GGYGMAGG 291
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 157 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 327
C ++ L + DDD +T + + +L+ V PG+ A G NV + IGS
Sbjct: 269 CTFNVLTIGDDDCMMTRQIAADLLRRLVVSESSTTPGVPTLASTGKNVLNYGFFIGS 325
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPP 538
PP P P PP PP PP
Sbjct: 133 PPPPPPPHYPPPPPHYPP 150
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +2
Query: 485 PPXXPTPXXPPXP-PPXPPXSXR 550
PP P P PP P PP PP R
Sbjct: 68 PPICPPPPPPPMPCPPPPPPMPR 90
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical
protein F12A10.1 protein.
Length = 120
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GGWGGG G G G GG
Sbjct: 57 GGWGGGYPGGYGGGYPGG 74
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXSXRHXP 559
PP P P PP PPP PP + P
Sbjct: 2 PPPPPPP--PPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 485 PPXXPTPXXPPXPPPXPPXSXRHXP 559
PP P P PP PPP PP + P
Sbjct: 2 PPPPPPP--PPPPPPPPPAASAPPP 24
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GGWGGG GG G G GG
Sbjct: 245 GGWGGG-GGGRGYGGGGG 261
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GG+GGG GG G G GG
Sbjct: 42 GGYGGGGGGGYGGGGYGG 59
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 497 PTPXXPPXPPPXPPXSXRHXPLLXP 571
P P PP PPP PP + + P
Sbjct: 135 PPPPSPPPPPPPPPPQLQQQQVQLP 159
>U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical
protein F12A10.7 protein.
Length = 113
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GG+GGG GG G G GG
Sbjct: 63 GGYGGGYGGGYGGGYGGG 80
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 537 GGWGGGXGGXXGVGXXGG 484
GG+GGG GG G G GG
Sbjct: 829 GGYGGGYGGGGGGGGGGG 846
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 500 TPXXPPXPPPXPPXSXRHXPLLXP 571
+P PP PPP PP S P+ P
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPP 1358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,410
Number of Sequences: 27780
Number of extensions: 232165
Number of successful extensions: 2641
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2646946214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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