Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N09
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 8e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.16
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.29
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.50
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.5
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 27 3.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.7
SPAC5D6.06c |||UDP-GlcNAc transferase associated protein Alg14|S... 26 6.2
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 26 8.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +2
Query: 695 KTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXXXXPPP 859
K+ PPP P P A PPP PPPPP PP PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPPPP 781
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 704 PPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXXXXPPPXXPXNP 877
PPP P PPP PPP PPPPP P P P P
Sbjct: 752 PPPAPIMGGPPPP------PPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 29.5 bits (63), Expect = 0.66
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +2
Query: 734 PPPGAXKXXPPPXXXXXXXPPPPP---XXXPPXPXXXXXXXXPPPXXPXNP 877
PPP P P PPP P PP P PPP P P
Sbjct: 735 PPPAVI--VPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.013
Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Frame = +2
Query: 629 PPPPXKXFXFFXKXXXGXXPQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPX 808
PPPP K G + PPP P P A P P PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPP----PPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 809 XXP-----PXPXXXXXXXXPPPXXP 868
P P P PP P
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/112 (22%), Positives = 29/112 (25%), Gaps = 3/112 (2%)
Frame = +2
Query: 551 PXPPFXXPPXXKKXXKNXGXXHLFXXPPPPXKXFXFFXKXXXGXXPQKKTXPPPXPXFFF 730
P PP P ++ + P PP +T PP P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 731 XPP---PGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXXXXPPPXXPXNP 877
PP P PP PP P P P PP P P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 704 PPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXP 826
PP P PP A PP PPP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXP 826
P P P P P P + P P P PPP PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Frame = +2
Query: 704 PPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPP-XXXPPXPXXXXXXXXPPPXXPXNP 877
P P P P P PP PP PP PP P PP P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXP 826
P P P P P P P P P P P PP P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +2
Query: 707 PPXPXFFFXPPP-GAXKXXPPPXXXXXXXPPPP-PXXXPPXPXXXXXXXXPPPXXP 868
PP P PP PP PP P P PP P PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 25.8 bits (54), Expect = 8.2
Identities = 17/66 (25%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXP--PPPPXXXPPXPXXXXXXXXPPP 859
P+ PP P PP PP P P P PP P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 860 XXPXNP 877
P
Sbjct: 1165 SVAAPP 1170
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/61 (24%), Positives = 16/61 (26%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXXXXPPPXX 865
P+ PP P PP PP PP P P PP
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 866 P 868
P
Sbjct: 1184 P 1184
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 737 PPGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXXXXPPPXXP 868
PP + PP PPPPP PP P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPT-PPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPP 820
PQ PP P PPP A P P PPP P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSA---PPMPAGPPSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 665 KXXXGXXPQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXPXXXXXX 844
K G P PP PP + PPP PPP PP P
Sbjct: 1676 KLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSV-----PPPPSAPPMP--AGPP 1728
Query: 845 XXPPPXXP 868
PPP P
Sbjct: 1729 SAPPPPLP 1736
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -3
Query: 876 GXXGXXGGGXXFXXXXXGXGGXXXGGGGGXXXXXXXGGGXXFXAPGGGXKKKXGXGGGXV 697
G G GGG G GG GG G G G PGG G GGG
Sbjct: 188 GGFGGFGGGSG--GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 696 FFCG 685
F G
Sbjct: 246 GFGG 249
Score = 27.9 bits (59), Expect = 2.0
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -3
Query: 876 GXXGXXGGGXXFXXXXXGXGGXXXGGGGGXXXXXXXGGGXXFXAPGGGXKKKXGXGGGXV 697
G G GG G GG G GG GGG PGG G GGG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG-----PGGFGGGLGGFGGGPG 259
Query: 696 FFCG 685
F G
Sbjct: 260 GFGG 263
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 876 GXXGXXGGGXXFXXXXXGXGGXXXGGGGGXXXXXXXGGGXXFXAPGG 736
G G GGG G G GG GG G G PGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +2
Query: 704 PPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPPXXXPPXP--XXXXXXXXPPPXXPXNP 877
PP P P P + P PPP P PP P PPP P P
Sbjct: 124 PPSAPA---PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPP-PGAXKXXPPPXXXXXXXPPPPPXXXPPXP 826
P + PP P P P A PP PP P PP P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 686 PQKKTXPPPXPXFFFXPPPGAXKXXPPPXXXXXXXPPPPP 805
P PPP F PP A P PPPPP
Sbjct: 161 PNSMVSPPPS----FQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 93 RSHFDVP*SLMRN*HRTQILRI 28
R FD+ SL RN H+T+ILR+
Sbjct: 63 RKRFDLQDSLSRNSHKTRILRM 84
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 734 PPPGAXKXXPPPXXXXXXXPPPPP 805
PP PPP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -3
Query: 876 GXXGXXGGGXXFXXXXXGXGGX---XXGGGGGXXXXXXXGGGXXFXAPGGGXKKKXGXGG 706
G G GG F G GG GGG G G G GG + G G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Query: 705 G 703
G
Sbjct: 70 G 70
>SPAC5D6.06c |||UDP-GlcNAc transferase associated protein
Alg14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 256 GPYVVLWYPFTGFLQKLLCRTAKALHVTKFARV 158
GP ++ G+L K L + K ++V FARV
Sbjct: 140 GPGTCVFICLLGYLAKFLGKNVKIVYVESFARV 172
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 171 LVTCNALAVRQSSFWRKPVKGYHNTTYGPIDPLXVTSXGCN 293
+V NA+ + P KGY N Y D L V CN
Sbjct: 179 VVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECN 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,877,074
Number of Sequences: 5004
Number of extensions: 55851
Number of successful extensions: 288
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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