Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_N08
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0415 - 21080600-21080941,21081119-21081217,21085363-210854...    32   0.70 
02_02_0363 + 9446055-9446524,9446658-9446771,9446856-9447281,944...    30   2.1  
03_05_0562 + 25648581-25648841,25650243-25650626                       29   5.0  

>05_04_0415 -
           21080600-21080941,21081119-21081217,21085363-21085455,
           21085802-21085855,21085943-21086044,21086449-21086523,
           21086662-21086784
          Length = 295

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -3

Query: 729 TSKGSGVPLHPTEQSHHVPKTIVSG--DFRSIQ*EKSKEIQPVVKSDDNNVSCDKILRSI 556
           +++ SG  +   E++  +PK+   G  D+RS + E  +E +   ++++    CDKILR +
Sbjct: 222 SAQTSGEIMTFMEEAQKIPKSFGDGYIDYRSDEEEMQEEEEGPEENEEEEDECDKILREV 281


>02_02_0363 +
           9446055-9446524,9446658-9446771,9446856-9447281,
           9447812-9447893,9447964-9448020,9448633-9448881,
           9448978-9449109,9449163-9449291
          Length = 552

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
 Frame = -1

Query: 296 NRSSPT--GCLA*GTPRKLAYKVLASARRVRPHTQPDSVCATTLHDDGGDAAGL 141
           N S+PT    LA  T  KL     ASA   +P   P SV        G +AAGL
Sbjct: 231 NHSAPTHRNSLAGTTRNKLPSSSAASAASAQPQPPPPSVVVVGAGGGGAEAAGL 284


>03_05_0562 + 25648581-25648841,25650243-25650626
          Length = 214

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 593 TTTFLVTRYSGPYRSASPDPNAKPPP*IKTNIGRPGF 483
           TTT   +  S P ++A P+P  KP P +   + +P F
Sbjct: 173 TTTGSPSSMSSPAKTAEPEPLCKPTPELDMVVDQPDF 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,806,204
Number of Sequences: 37544
Number of extensions: 600015
Number of successful extensions: 1689
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1687
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)