Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_N07
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    91   1e-18
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799...    29   3.8  
07_03_0924 - 22631196-22631354,22631761-22632135                       29   6.7  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   6.7  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 43/76 (56%), Positives = 57/76 (75%)
 Frame = +2

Query: 128 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 307
           +S +E+AC  +ALIL DD + +T EKI+T++KAA + VE YWPGLFAK LE  +V DLI 
Sbjct: 1   MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60

Query: 308 NIGSGVGAAPAAGWSA 355
           ++GSG GAAP A  +A
Sbjct: 61  SVGSGGGAAPVAAAAA 76


>02_02_0220 -
           7992124-7992351,7992458-7992562,7993499-7993711,
           7993937-7994196,7994425-7994701,7995226-7995371,
           7995519-7995903,7996680-7996964
          Length = 632

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +2

Query: 92  GLRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKIST 214
           G+R+LA+     V+K +     S  +L+ +DVA+TG+ ++T
Sbjct: 249 GIRKLAQIFQSSVAKKKAVGKKSKALLLGEDVAITGDCVTT 289


>07_03_0924 - 22631196-22631354,22631761-22632135
          Length = 177

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 848 RGXXGXXPPPXHPPXP 895
           RG  G  PPP HPP P
Sbjct: 70  RGHAGMGPPPPHPPPP 85


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 816 PXXXPXXXPXXGGGXXXXPPPXTPPXP 896
           P   P   P   GG    PPP  PP P
Sbjct: 250 PPAAPGTLPNGSGGPPRPPPPQVPPPP 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,985,620
Number of Sequences: 37544
Number of extensions: 320304
Number of successful extensions: 1144
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)