Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_N05
(904 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.024
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.032
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.042
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.056
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.097
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.4
SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase Vas1|Schizos... 26 8.4
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 8.4
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 8.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 796 PXPPPXXX-GXPPPXXPXPXXXGPPPPXXPXXPP 894
P PPP G PPP P P G PP P PP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 737 KXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPPP 901
K +PP PP AP P P PP PPP PPPP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 716 LPIPXXXKXXXNAPPXXPPXPXGXXGAPXPP 808
+P+P PP PP P G GA PP
Sbjct: 749 IPVPPPAPIMGGPPP--PPPPPGVAGAGPPP 777
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -3
Query: 893 GGXXGXXGGGGPXXXGXGXXGGGXPXXXGGG-XGPPXXRXGXGVXXGG 753
GG G GG G G G GGG GGG G R G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -3
Query: 893 GGXXGXXGGGGPXXXGXGXX-GGGXPXXXGGGXGPPXXRXGXGVXXGG 753
GG G GG G G G GGG GG G R G G GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -3
Query: 896 GGGXXGXXGGG-GPXXXGXGXXGGGXPXXXGGGXGPPXXRXGXGVXXGGH 750
GGG G GGG G G G GG G G + G V H
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPH 78
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.032
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -3
Query: 893 GGXXGXXGGGGPXXXGXGXXGGGXPXXXGGGXGPPXXRXGXGVXXGGH 750
GG G GG G G G GGG GG G G G GGH
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGH 268
Score = 32.7 bits (71), Expect = 0.073
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Frame = -3
Query: 896 GGGXXGXXG-----GGGPXXXGXGXXG-GGXPXXXGGGXG 795
GGG G G GGGP G G G GG P GGG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 9/57 (15%)
Frame = -3
Query: 896 GGGXXGXXGGGGPXXXGXGXXG-----GGXPXXXGG----GXGPPXXRXGXGVXXGG 753
GGG G GG G G G G GG GG G GP G G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 896 GGGXXGXXGGGGPXXXGXGXXGGGXPXXXGG 804
GGG G GG G G G GGG P GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG-PGGHGG 270
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 895 GGGXXXXXGGGXXXXGGXXXXGGGXXXXXGGXXGPPXXGGXXGXXXGGIXXG 740
G G GG GG GGG GG G G G GG G
Sbjct: 206 GFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = -2
Query: 897 GGGXXGXXXG-GGXXXXGGXXXXG---GXXXXXXGGXGA-PXXPXGXGGXXGG 754
GGG G G GG GG G G GG G P G GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = -3
Query: 842 GXXGGGXPXXXGGGXGPPXXRXGXGVXXG----GHFXRXYXGRELGGP 711
G GGG GG GPP G G G GH + G GGP
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG-GGP 230
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 896 GGGXXGXXGGGGPXXXGXGXXGGGXP 819
GGG G GGGP G G G G P
Sbjct: 248 GGGLGGF--GGGPGGFGGGPGGHGGP 271
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +2
Query: 719 PIPXXXKXXXNAPPXXPPX--PXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXP 892
P+P +APP PP P GAP P P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 893 PPP 901
PPP
Sbjct: 476 PPP 478
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +1
Query: 715 PPNSLPX*XLXKCPPXXTPX--PXRXXGGPXPPPXXXGXP-PPXXPXPXXXGPP-PPXXP 882
PP P PP P P G P PP P P P PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 883 XXPP 894
PP
Sbjct: 475 APPP 478
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 718 PNSLPX*XLXKCPPXXTPXPXRXXGGPXPPPXXXGXPPPXXPXPXXXGPPPPXXPXXPPP 897
P SLP P P P PP G P P PPP P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.90
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Frame = +1
Query: 715 PPNSLPX*XLXKCPPXXT-------PXPXRXXGGPXPPPXXXGXPPPXXPXPXXXGPP-P 870
PP ++P PP P P P PP PP P PP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 871 PXXPXXPP 894
P P PP
Sbjct: 451 PSAPIAPP 458
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/62 (27%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Frame = +2
Query: 719 PIPXXXKXXXNAPPXXPPXPXGXXGAPXPP---XXXXXXPPXXXXPPXXXXPPPXXXPXX 889
P P + PP PP G PP PP P PP P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 890 PP 895
PP
Sbjct: 436 PP 437
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 10/57 (17%)
Frame = +1
Query: 757 PXXTPXPXRXXGGPXP-PPXXXGXPPPXXP--XPXXXGPPPP-------XXPXXPPP 897
P P P G P PP PPP P P PPP P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.056
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 796 PXPPPXXXGXPPPXXPXPXXXGPPPPXXPXXP 891
P PPP PPP P GPP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +2
Query: 755 PPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPPP 901
P PP P PP PP P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.68
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 719 PIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXP 829
P P PP PP P G AP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 741 PXKMPPXXXPXX-PPXXGGPXXPPXXXXXPPPXXXXPPXXXXPPPXXXXXPPP 896
P PP PP P PP PPP PP PP PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-PPMPAGPP---SAPPPP 1734
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 794 APXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPPP 901
AP P P PP P P P PPP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.097
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 790 GGPXPPPXXXGXPPPXXPXPXXXGPPPP 873
G P PPP G PP P P PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPP----PPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 820 GXPPPXXPXPXXXGPPPPXXPXXPPP 897
G PPP P P G PP P PPP
Sbjct: 7 GNPPPPPPPP---GFEPPSQPPPPPP 29
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.22
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Frame = +2
Query: 704 GXKDLPIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPP-XXXXPPPXXX 880
G +P P AP PP P AP P PP PPP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 881 PXXPPP 898
P P P
Sbjct: 1198 PPVPKP 1203
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +1
Query: 754 PPXXTPXPXRXXGGPXPPPXXXGXPPPXXPXPXXXGPPPPXXPXXPPP 897
P P P G P PP P G PP P PP
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 769 PXPXRXXGGPXPPPXXXGXPPPXXPXPXXXGPPPPXXPXXPPP 897
P P G P PP P P PPP P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = +2
Query: 716 LPIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPP 895
+P P PP P G P P PP PP P P PP
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP--VPPPSEAPPVPKPSVGVPP 1209
Query: 896 PP 901
P
Sbjct: 1210 VP 1211
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 752 APPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPPP 901
AP PP P AP P PP P PP P PP
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPV----PAPSGAPPVPKPSVAAPP 1132
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 722 IPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPPP 901
IP K PP PP AP P PP PP P P PP P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSE-----APPVPKPSVGVPPVP--PPSTAPPVPTPSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = +2
Query: 716 LPIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPP 895
+P P AP PP P AP P P P P P P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPK 1163
Query: 896 P 898
P
Sbjct: 1164 P 1164
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 716 LPIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPP 895
+P P AP PP P G P P PP P PP P P
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVP-APSGIPPVPKPSVAAPP---VPKPSVAVPPVPAPSGAP 1121
Query: 896 P 898
P
Sbjct: 1122 P 1122
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/60 (28%), Positives = 17/60 (28%), Gaps = 3/60 (5%)
Frame = +3
Query: 726 PXXIXPXKMPPXXXPXXPPXXGGPXXPPXXXXXPP---PXXXXPPXXXXPPPXXXXXPPP 896
P P P P P G P P PP P PP P PPP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP-VPKPAAGVPPVPPP 1194
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/68 (25%), Positives = 19/68 (27%)
Frame = +2
Query: 698 TGGXKDLPIPXXXKXXXNAPPXXPPXPXGXXGAPXPPXXXXXXPPXXXXPPXXXXPPPXX 877
+ G +P P P PP P G PP P P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV--PPVPPPSTAPPVPTPSAGLPPVPVP 1232
Query: 878 XPXXPPPP 901
PP P
Sbjct: 1233 TAKAPPVP 1240
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 896 GGGXXGXXGGGGPXXXGXGXXGGGXPXXXGGGXG 795
GG G GGG G G GG GG G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 804 PPXXXXXPPPXXXXPPXXXXPPPXXXXXPPP 896
PP PP PP PP PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 715 PPNSLPX*XLXKCPPXXTPXPXRXXGGPXP--PPXXXGXPPPXXPXPXXXGPPPPXXPXX 888
P S+P PP + P P P P PP P P PP P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP-- 202
Query: 889 PPP 897
PPP
Sbjct: 203 PPP 205
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 752 APPXXPPXPXGXXGAPXPP 808
APP PP P AP PP
Sbjct: 4 APPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 794 APXPPXXXXXXPPXXXXPPXXXXPPPXXXPXXPPP 898
AP PP P PP PPP P P
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Frame = +1
Query: 754 PPXXTPXPXRXXGGPXPPPXXXGXPP-PXXPXPXXXGPPPPXXPXXPPP 897
P P P P G PP P P P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC4A8.08c |vas1||mitochondrial valine-tRNA ligase
Vas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 950
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3
Query: 362 VFTFFKSRNSRVSWNGILYFQ**SV*FNYMHIELQFDIPINQNSY*VI 219
+F F +S +SR + +G+L F+ NY+HIE FDI Q+ + +I
Sbjct: 1 MFHFQRSFSSRKA-HGLLSFKN----RNYIHIEAPFDIAAIQDGWNII 43
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 383 PYTGYDSGRKIIASKTKFSSKIQELNTIEEKQ 478
P++GY+ GR ++ S E+NT+++ Q
Sbjct: 634 PHSGYEDGRLEYSADLASKSNRNEINTMQDVQ 665
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 872 GGGGPXXXGXGXXGGGXPXXXGGGXGPPXXR 780
GG G G G GG GGG GP R
Sbjct: 157 GGFGTRTRGGGMPGGFANMFGGGGAGPHARR 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,985,690
Number of Sequences: 5004
Number of extensions: 58016
Number of successful extensions: 420
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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