Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M24
         (1050 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69...    36   0.071

>04_01_0069 -
           697811-697876,697956-698166,698265-698359,698448-698513,
           698595-698643,698720-698770,698856-698908,699263-699331,
           699874-699928,700011-700099,700217-700302,700376-700432,
           700575-700716,701637-702032
          Length = 494

 Score = 35.5 bits (78), Expect = 0.071
 Identities = 18/57 (31%), Positives = 20/57 (35%)
 Frame = +3

Query: 732 PXPFPXPXTXXIRPSXCSXPPXPFCXXPARGGLXHYXSXXXPRTVLRXHPQVXPPLP 902
           P P P P    +R S    PP P    P  G   HY     P  + R      PP P
Sbjct: 16  PAPAPAPPQVFLRRSVLPPPPAPHHAPPPPGAHVHYFRAASPIPIFRAAASSRPPRP 72


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,717
Number of Sequences: 37544
Number of extensions: 162824
Number of successful extensions: 237
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3106134136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)