BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M23
(1001 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 124 1e-28
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 124 1e-28
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 124 1e-28
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 112 6e-25
AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p pro... 34 0.27
AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,... 34 0.27
AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,... 34 0.27
AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,... 34 0.27
AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,... 34 0.27
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 32 1.1
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 32 1.1
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 30 4.4
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 30 4.4
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 30 4.4
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 30 4.4
BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p pro... 30 5.8
BT001437-1|AAN71192.1| 195|Drosophila melanogaster GH24648p pro... 30 5.8
AE014296-776|AAN11589.1| 575|Drosophila melanogaster CG32260-PA... 30 5.8
AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA... 30 5.8
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 65/102 (63%), Positives = 69/102 (67%)
Frame = +1
Query: 76 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 255
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 256 VPQYKLITPAVVSERLKVRGSLARRALIELREXGLIXXVVXH 381
VP YKLITP+VVSERLK+RGSLA+RALIELRE GLI VV H
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 65/102 (63%), Positives = 69/102 (67%)
Frame = +1
Query: 76 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 255
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 256 VPQYKLITPAVVSERLKVRGSLARRALIELREXGLIXXVVXH 381
VP YKLITP+VVSERLK+RGSLA+RALIELRE GLI VV H
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 124 bits (300), Expect = 1e-28
Identities = 65/102 (63%), Positives = 69/102 (67%)
Frame = +1
Query: 76 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKE 255
MPPKKDAK+SAKQPQ LNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 256 VPQYKLITPAVVSERLKVRGSLARRALIELREXGLIXXVVXH 381
VP YKLITP+VVSERLK+RGSLA+RALIELRE GLI VV H
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 112 bits (270), Expect = 6e-25
Identities = 60/98 (61%), Positives = 64/98 (65%)
Frame = +1
Query: 88 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQY 267
KDAK+SAKQPQ LNNQVLFDK TYEKLYKEVP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 268 KLITPAVVSERLKVRGSLARRALIELREXGLIXXVVXH 381
KLITP+VVSERLK+RGSL +RALIELRE GLI VV H
Sbjct: 61 KLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQH 98
>AY119486-1|AAM50140.1| 1049|Drosophila melanogaster GH07742p
protein.
Length = 1049
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXPL 875
P P F+ PP PP P PP P PL
Sbjct: 479 PPPPPLHAFVAPPPPPPPPPPPPPPL 504
>AE014134-691|AAF51054.1| 1059|Drosophila melanogaster CG3399-PA,
isoform A protein.
Length = 1059
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXPL 875
P P F+ PP PP P PP P PL
Sbjct: 489 PPPPPLHAFVAPPPPPPPPPPPPPPL 514
>AE014134-690|AAN10367.1| 1049|Drosophila melanogaster CG3399-PB,
isoform B protein.
Length = 1049
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXPL 875
P P F+ PP PP P PP P PL
Sbjct: 479 PPPPPLHAFVAPPPPPPPPPPPPPPL 504
>AE014134-689|AAF51053.2| 1207|Drosophila melanogaster CG3399-PD,
isoform D protein.
Length = 1207
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXPL 875
P P F+ PP PP P PP P PL
Sbjct: 637 PPPPPLHAFVAPPPPPPPPPPPPPPL 662
>AE014134-688|AAN10366.1| 1154|Drosophila melanogaster CG3399-PC,
isoform C protein.
Length = 1154
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXPL 875
P P F+ PP PP P PP P PL
Sbjct: 584 PPPPPLHAFVAPPPPPPPPPPPPPPL 609
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/103 (24%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
Frame = +3
Query: 567 HXXXXXPPPPPXLPFXXPAXLGPIRDXXXXXXGNHX*XRXXXLXP---XPTXXXFSSSXX 737
H PPPPP P P P + + P P
Sbjct: 146 HHHHPAPPPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHHHH 205
Query: 738 FPPXXGPPGFXLXSXXRXXXPGAXPXFXFLXPPXPPXPXPPXP 866
GPPG P P + PP PP P PP P
Sbjct: 206 HKGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPP 248
Score = 31.9 bits (69), Expect = 1.4
Identities = 32/128 (25%), Positives = 37/128 (28%), Gaps = 1/128 (0%)
Frame = +3
Query: 492 HXFPRXAGSPXXXXVKXXXPP*XXXHXXXXXPPPPPXLP-FXXPAXLGPIRDXXXXXXGN 668
H P P PP H P PP P P L P + G+
Sbjct: 147 HHHPAPPPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEH----GH 202
Query: 669 HX*XRXXXLXPXPTXXXFSSSXXFPPXXGPPGFXLXSXXRXXXPGAXPXFXFLXPPXPPX 848
H + P P + PP GPPG P P + PP P
Sbjct: 203 HHHHKGSKGPPGPPGPP-GTGPPGPP--GPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYP 259
Query: 849 PXPPXPXP 872
P P P P
Sbjct: 260 PPGPYPGP 267
Score = 31.5 bits (68), Expect = 1.9
Identities = 26/99 (26%), Positives = 30/99 (30%)
Frame = +2
Query: 584 PPPPPXTAXXXPCXPWSHS*LPLXXXRXPLIXPPXPXXTPXXXXSXFILXXVPAXRWXPG 763
PPPPP P P HS P++ PP P +P + G
Sbjct: 153 PPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIP-----------LPPQKGEHG 201
Query: 764 XXXAXTXSXXPPGGPXXXXXFXPPXPXXXXSXXXXXPPP 880
S PP GP PP P PPP
Sbjct: 202 HHHHHKGSKGPP-GPPGPPGTGPPGPPGPPGTTYPQPPP 239
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 32.3 bits (70), Expect = 1.1
Identities = 25/103 (24%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
Frame = +3
Query: 567 HXXXXXPPPPPXLPFXXPAXLGPIRDXXXXXXGNHX*XRXXXLXP---XPTXXXFSSSXX 737
H PPPPP P P P + + P P
Sbjct: 148 HHHHPAPPPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEHGHHHH 207
Query: 738 FPPXXGPPGFXLXSXXRXXXPGAXPXFXFLXPPXPPXPXPPXP 866
GPPG P P + PP PP P PP P
Sbjct: 208 HKGSKGPPGPPGPPGTGPPGPPGPPGTTYPQPPPPPPPPPPPP 250
Score = 31.9 bits (69), Expect = 1.4
Identities = 32/128 (25%), Positives = 37/128 (28%), Gaps = 1/128 (0%)
Frame = +3
Query: 492 HXFPRXAGSPXXXXVKXXXPP*XXXHXXXXXPPPPPXLP-FXXPAXLGPIRDXXXXXXGN 668
H P P PP H P PP P P L P + G+
Sbjct: 149 HHHPAPPPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIPLPPQKGEH----GH 204
Query: 669 HX*XRXXXLXPXPTXXXFSSSXXFPPXXGPPGFXLXSXXRXXXPGAXPXFXFLXPPXPPX 848
H + P P + PP GPPG P P + PP P
Sbjct: 205 HHHHKGSKGPPGPPGPP-GTGPPGPP--GPPGTTYPQPPPPPPPPPPPPPSYPYPPYPYP 261
Query: 849 PXPPXPXP 872
P P P P
Sbjct: 262 PPGPYPGP 269
Score = 31.5 bits (68), Expect = 1.9
Identities = 26/99 (26%), Positives = 30/99 (30%)
Frame = +2
Query: 584 PPPPPXTAXXXPCXPWSHS*LPLXXXRXPLIXPPXPXXTPXXXXSXFILXXVPAXRWXPG 763
PPPPP P P HS P++ PP P +P + G
Sbjct: 155 PPPPPPPPPPPPPPPPPHSHPHSHHPHPPIVTPPIIVPIP-----------LPPQKGEHG 203
Query: 764 XXXAXTXSXXPPGGPXXXXXFXPPXPXXXXSXXXXXPPP 880
S PP GP PP P PPP
Sbjct: 204 HHHHHKGSKGPP-GPPGPPGTGPPGPPGPPGTTYPQPPP 241
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 30.3 bits (65), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 859 GGXGXGGXGGXKXXXXGXAPGXXXRXXXXXXXPGGPXXGG 740
GG G GG GG G G PGGP GG
Sbjct: 424 GGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGYGG 463
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 30.3 bits (65), Expect = 4.4
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 3/100 (3%)
Frame = +3
Query: 699 PXPTXXXFSSSXXFPPXXGPPGFXLXSXXRXXXPGAX-PXFX--FLXPPXPPXPXPPXPX 869
P P S+ PP GPP P A P + PP P P PP P
Sbjct: 127 PRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
Query: 870 PLXXXXXXXXPXXXXXXRRPXPXXXTXXXXPXXXXFXPXP 989
P P RP P + P P
Sbjct: 187 PGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPP 226
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 30.3 bits (65), Expect = 4.4
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 3/100 (3%)
Frame = +3
Query: 699 PXPTXXXFSSSXXFPPXXGPPGFXLXSXXRXXXPGAX-PXFX--FLXPPXPPXPXPPXPX 869
P P S+ PP GPP P A P + PP P P PP P
Sbjct: 127 PRPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
Query: 870 PLXXXXXXXXPXXXXXXRRPXPXXXTXXXXPXXXXFXPXP 989
P P RP P + P P
Sbjct: 187 PGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPP 226
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 30.3 bits (65), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 859 GGXGXGGXGGXKXXXXGXAPGXXXRXXXXXXXPGGPXXGG 740
GG G GG GG G G PGGP GG
Sbjct: 496 GGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGYGG 535
>BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p
protein.
Length = 478
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/124 (21%), Positives = 32/124 (25%)
Frame = +2
Query: 509 RGIXPXXXGXXXXPPLXTXXXXXXXPPPPPXTAXXXPCXPWSHS*LPLXXXRXPLIXPPX 688
R + P PPL PPPPP P P P PP
Sbjct: 145 RRVVPGWQLPPPPPPLEEPEKCPLSPPPPPSPPAMAPPLPAKPYPYPDLAAMPFPDRPPA 204
Query: 689 PXXTPXXXXSXFILXXVPAXRWXPGXXXAXTXSXXPPGGPXXXXXFXPPXPXXXXSXXXX 868
TP + +P+ P PP P P P +
Sbjct: 205 YTPTPDPMPPVGGVMVMPSPTPPPPAGGVLVMPRPPPPPPPAGGVLVMPPPPPSFTPAEV 264
Query: 869 XPPP 880
PPP
Sbjct: 265 APPP 268
>BT001437-1|AAN71192.1| 195|Drosophila melanogaster GH24648p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXP 872
PG P + P PP P PP P P
Sbjct: 32 PGYYPIYALPPPQGPPYPAPPPPPP 56
>AE014296-776|AAN11589.1| 575|Drosophila melanogaster CG32260-PA
protein.
Length = 575
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 798 PGAXPXFXFLXPPXPPXPXPPXPXP 872
PG P + P PP P PP P P
Sbjct: 32 PGYYPIYALPPPQGPPYPAPPPPPP 56
>AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA,
isoform A protein.
Length = 478
Score = 29.9 bits (64), Expect = 5.8
Identities = 27/124 (21%), Positives = 32/124 (25%)
Frame = +2
Query: 509 RGIXPXXXGXXXXPPLXTXXXXXXXPPPPPXTAXXXPCXPWSHS*LPLXXXRXPLIXPPX 688
R + P PPL PPPPP P P P PP
Sbjct: 145 RRVVPGWQLPPPPPPLEEPEKCPLSPPPPPSPPAMAPPLPAKPYPYPDLAAMPFPDRPPA 204
Query: 689 PXXTPXXXXSXFILXXVPAXRWXPGXXXAXTXSXXPPGGPXXXXXFXPPXPXXXXSXXXX 868
TP + +P+ P PP P P P +
Sbjct: 205 YTPTPDPMPPVGGVMVMPSPTPPPPAGGVLVMPRPPPPPPPAGGVLVMPPPPPSFTPAEV 264
Query: 869 XPPP 880
PPP
Sbjct: 265 APPP 268
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,355,609
Number of Sequences: 53049
Number of extensions: 822518
Number of successful extensions: 4539
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3728
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5078842344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -