Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M21
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1127 + 8930593-8932681,8932812-8933401                           32   0.54 
11_01_0071 + 565349-565814,566626-566692,567255-567288,567747-56...    29   6.6  
10_08_0520 - 18495118-18498237                                         29   6.6  
10_08_0366 - 17232010-17232061,17232546-17232601,17232692-172327...    29   6.6  
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417...    28   8.7  
07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451     28   8.7  
01_05_0744 - 24840172-24840327,24840476-24840564,24840856-248409...    28   8.7  

>01_01_1127 + 8930593-8932681,8932812-8933401
          Length = 892

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +1

Query: 253 GAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPNTTHQNLMCPKTQ 405
           G E CP+ + +  WLK   L  P+EA   +++  ++ PN+    L   K +
Sbjct: 331 GCEECPTNEDV--WLKACRLASPDEAKAVIARGVKEIPNSVKLWLQAAKLE 379


>11_01_0071 +
           565349-565814,566626-566692,567255-567288,567747-567860
          Length = 226

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 178 AVSSLRHARNGSSYRKHRVTCPFTSGAETCPSKKSIL---IWLKLSTLCPPEEALVKMSK 348
           A+S++   RN +  R+     PF +G  +CP   ++    +WL++  L  P   ++ + +
Sbjct: 119 AISTVYTRRNTAQKRRTNDNTPFPAGTSSCPPPATLARKPLWLRVLGLFHPWFLVIDLKR 178

Query: 349 Q 351
           +
Sbjct: 179 R 179


>10_08_0520 - 18495118-18498237
          Length = 1039

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 253 GAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPNTTHQNLMCPKTQ 405
           G E CP+ + +  W++   L  P+EA   +++  +  PN+    L   K +
Sbjct: 426 GCEECPTNEDV--WVEACRLASPDEAKAVIARGVKAIPNSVKLWLQAAKLE 474


>10_08_0366 -
           17232010-17232061,17232546-17232601,17232692-17232727,
           17232861-17232941,17233060-17233131,17233394-17233465,
           17233555-17233659,17233754-17233804,17234075-17234109,
           17234692-17234736,17234940-17234973
          Length = 212

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 270 LEEINPDLAEAFNALPAGRSAGKDVEA--APEIPEHYSSKLNVPENP 404
           L+EI  D+A   ++ P GR  GK V+A  + E+ E    +L   +NP
Sbjct: 167 LDEIGVDIASQLSSAPKGRITGKKVQADESSELDE-LEKRLAALKNP 212


>12_01_0526 -
           4171313-4171417,4171514-4171597,4171688-4171758,
           4171814-4171891,4174482-4174569,4174659-4174850,
           4174939-4175802
          Length = 493

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 273 EEINPDLAEAFNALPAGRSAGKDVEAAPEIPE 368
           +++N DL     + P GR   KDVEAA   P+
Sbjct: 200 KDLNVDLNSITGSGPGGRIVAKDVEAAAAAPK 231


>07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451
          Length = 511

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 321 GRSAGKDVEAAP-EIPEHYSSKLNVPENPEIGDSR 422
           GR A K  EAAP   P    S+ +VP  P  GD R
Sbjct: 18  GREARKSKEAAPPREPRRARSRSHVPPPPGAGDGR 52


>01_05_0744 -
           24840172-24840327,24840476-24840564,24840856-24840928,
           24841006-24841089,24841355-24841505,24842145-24842227,
           24842358-24842504
          Length = 260

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 247 TSGAETCPSKKSIL-IWLKLSTLCPPEEALVKMSKQPQKFPNTTH 378
           T G +  P +K    IWL+  T  P E A + + K+P   P   H
Sbjct: 147 TQGLDLIPQQKPFSGIWLQRKTPKPMEHANLNLCKEPSTSPLPKH 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,814
Number of Sequences: 37544
Number of extensions: 320154
Number of successful extensions: 668
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)