Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M21
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10313-1|CAA71366.1|  453|Homo sapiens PC4 protein protein.            31   5.6  
BT019890-1|AAV38693.1|  451|Homo sapiens interferon-related deve...    31   5.6  
BT019889-1|AAV38692.1|  451|Homo sapiens interferon-related deve...    31   5.6  
BC001272-1|AAH01272.1|  451|Homo sapiens interferon-related deve...    31   5.6  
AC005192-2|AAS07421.1|  245|Homo sapiens unknown protein.              31   5.6  
AC005192-1|AAC24562.1|  262|Homo sapiens unknown protein.              31   5.6  
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.        30   9.9  
AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.     30   9.9  

>Y10313-1|CAA71366.1|  453|Homo sapiens PC4 protein protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273


>BT019890-1|AAV38693.1|  451|Homo sapiens interferon-related
           developmental regulator 1 protein.
          Length = 451

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273


>BT019889-1|AAV38692.1|  451|Homo sapiens interferon-related
           developmental regulator 1 protein.
          Length = 451

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273


>BC001272-1|AAH01272.1|  451|Homo sapiens interferon-related
           developmental regulator 1 protein.
          Length = 451

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 222 SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 273


>AC005192-2|AAS07421.1|  245|Homo sapiens unknown protein.
          Length = 245

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 16  SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 67


>AC005192-1|AAC24562.1|  262|Homo sapiens unknown protein.
          Length = 262

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 214 SYRKHRVTCPFTSGAETCPSKKSILIWLKLSTLCPPEEALVKMSKQPQKFPN 369
           SY K + T    S   T     S+L W  L T+CP  E   K+     K P+
Sbjct: 33  SYLKEKDTTVICSTPNTVLHISSLLAWTLLLTICPINEVKKKLEMHFHKLPS 84


>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
          Length = 4169

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 376  HQNLMCPKTQKLVIAALKNRNFSKRAQLR 462
            HQN MCP  +++ +A  KN+  SK+  ++
Sbjct: 4090 HQNRMCPLPKRVFLAIQKNKPISKKEMIQ 4118


>AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.
          Length = 2055

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 376  HQNLMCPKTQKLVIAALKNRNFSKRAQLR 462
            HQN MCP  +++ +A  KN+  SK+  ++
Sbjct: 2023 HQNRMCPLPKRVFLAIQKNKPISKKEMIQ 2051


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,381,351
Number of Sequences: 237096
Number of extensions: 1706913
Number of successful extensions: 3263
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3263
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)