Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M18
(954 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 0.035
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 0.13
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.42
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 25 0.89
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 5.1
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 9.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect(2) = 0.035
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 684 LXHSPXXTPPXXPXPTPPPXPXPPXP 761
L SP PP PTP P P P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPP 753
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 846 PXPXPLPXXPXPPTPXPXXXPPSP 917
P P P P PP P PP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 24.6 bits (51), Expect(2) = 0.035
Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Frame = +3
Query: 846 PXPXPLPXXPXPPTPXP---XXXPPSP 917
P P P+ P PP P P PP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect(2) = 0.13
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 705 TPPXXPXPTPPPXPXPPXP 761
TPP P PPP PP P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMP 1724
Score = 26.6 bits (56), Expect(2) = 0.27
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 708 PPXXPXPTPPPXP--XPPXPT 764
PP PTPPP P PP P+
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPS 1719
Score = 25.0 bits (52), Expect(2) = 0.27
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 837 ASXPXPXPLPXXPXPPTPXPXXXPPS-PSXLHPXXXHPS 950
A P P P+ P P P PPS P P PS
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 24.2 bits (50), Expect(2) = 0.27
Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 3/25 (12%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPP---XPXPPXP 761
P TPP P PP P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPP 1710
Score = 22.6 bits (46), Expect(2) = 0.27
Identities = 10/32 (31%), Positives = 12/32 (37%)
Frame = +3
Query: 852 PXPLPXXPXPPTPXPXXXPPSPSXLHPXXXHP 947
P P P P P PP P+ P +P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 22.2 bits (45), Expect(2) = 0.13
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +3
Query: 846 PXPXPLPXXPXPPTPXPXXXPPSPSXLHP 932
P P+P P P P +PS +P
Sbjct: 1718 PSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +3
Query: 693 SPXXTPPXX-PXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPX 869
+P PP P PP P P + S P P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 870 XPXPPTPXPXXXP--PSPSXLHPXXXHPS 950
PP P P P P PS P PS
Sbjct: 1147 VAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 834 LASXPXPXPLPXXPXPPTPXPXXXPPSP 917
L+S P PLP PP P P PP P
Sbjct: 1017 LSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 30.3 bits (65), Expect = 0.42
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPXXP 875
P P P PPP PP P L P P+P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL----PPVPVPTAK 1235
Query: 876 XPPTPXPXXXPPSPS 920
PP P P PS S
Sbjct: 1236 APPVPAPSSEAPSVS 1250
Score = 29.9 bits (64), Expect = 0.55
Identities = 23/89 (25%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +3
Query: 693 SPXXTPPXXPXPT-PPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPX 869
+P P P P+ PP P P S P P P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPS 1127
Query: 870 XPXPPTPXPXXXP--PSPSXLHPXXXHPS 950
PP P P P P PS P PS
Sbjct: 1128 VAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 840 SXPXPXPLPXXPXPPTPXPXXXPPSPS 920
S P P P P P P P PP P+
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPA 1087
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/87 (25%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPXXP 875
P P P P P PP P +S P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG- 1081
Query: 876 XPPTPXPXXXP--PSPSXLHPXXXHPS 950
PP P P P P PS P PS
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/95 (24%), Positives = 24/95 (25%), Gaps = 3/95 (3%)
Frame = +3
Query: 675 PXXLXHSPXXTPPXXPXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXP 854
P +P P P P P PP P S P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
Query: 855 XPLPXXPXPPTPXPXXXP---PSPSXLHPXXXHPS 950
P P PP P P P PS P PS
Sbjct: 1085 VPAPSG-IPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Score = 26.2 bits (55), Expect = 6.8
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPXXP 875
P P P P P PP P +A+ P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS--VAAPPVPAPSSGIP 1179
Query: 876 XPPTPXPXXXPPSPSXLHPXXXHPS 950
P P P P P PS
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPS 1204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.42
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASXPXPXPLPXXP 875
P TPP P PP P P+ A P PLP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP--AGMPAAPPLPPAA 473
Query: 876 XPPTPXPXXXPPSP 917
P P P P +P
Sbjct: 474 PAPPPAPAPAPAAP 487
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 24.6 bits (51), Expect(2) = 0.89
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 846 PXPXPLPXXPXPPTPXPXXXPPSPS 920
P PLP P P P P PP P+
Sbjct: 120 PGEPPLPDEPVPEEPLP-GEPPLPN 143
Score = 23.0 bits (47), Expect(2) = 0.89
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 711 PXXPXPTPPPXPXPPXP 761
P P P PP P P P
Sbjct: 99 PEEPLPREPPLPNEPVP 115
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.8
Identities = 18/82 (21%), Positives = 20/82 (24%), Gaps = 3/82 (3%)
Frame = +3
Query: 675 PXXLXHSPXXTPPXXPXPT---PPPXPXPPXPTXXXXXXXXXXXXXXXXXXXXXXXLASX 845
P P P P+ PPP P PP +
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 846 PXPXPLPXXPXPPTPXPXXXPP 911
P P PP P P PP
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 2.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 874 PXPPPPLPPXXXP 912
P PPPP PP P
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 22.2 bits (45), Expect(2) = 2.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 871 PPXPPPPLP 897
PP PPPP P
Sbjct: 189 PPPPPPPPP 197
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 864 PXXPXPPTPXPXXXPPSPSXLHPXXXHPS 950
P P PPTP PP+ + P PS
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPS 153
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 837 ASXPXPXPLPXXPXPPTPXPXXXPPSPSXLHP 932
++ P P P P P P PP PS L P
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 852 PXPLPXXPXPPTPXPXXXPPSPSXLHP 932
P P P P P P PP PS P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 708 PPXXPXPTPPPXPXPPXPT 764
P P P P P P PP PT
Sbjct: 802 PFKAPPPAPLPPPAPPLPT 820
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 696 PXXTPPXXPXPTPPPXPXPP 755
P PP P+ PP P PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,376,272
Number of Sequences: 5004
Number of extensions: 41697
Number of successful extensions: 318
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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