Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M15
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical pr...    58   1e-08
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     29   6.1  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    29   6.1  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    29   6.1  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    29   6.1  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    29   6.1  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     29   6.1  

>U53149-6|AAZ82856.1|  284|Caenorhabditis elegans Hypothetical
           protein C24B5.4 protein.
          Length = 284

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = +2

Query: 251 VLSNGLTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKLVEIGGPPYLVPQVQRDKIY 430
           V    L +NF+ VEV++ D PDL++PP+  KS G   + ++ E+GGP  L P    D  +
Sbjct: 1   VFQTSLLSNFENVEVNIVDCPDLSKPPFNQKSSGFGHNLRIAEVGGPGNLYPGFHIDHQF 60

Query: 431 DLAKLLETLE 460
           D+ K+ +  E
Sbjct: 61  DIPKIGKVCE 70


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 1802 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 1861

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 1862 IQLIEA--PRAP 1871


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 1719 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 1778

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 1779 IQLIEA--PRAP 1788


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 2040 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 2099

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 2100 IQLIEA--PRAP 2109


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 2040 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 2099

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 2100 IQLIEA--PRAP 2109


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 2040 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 2099

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 2100 IQLIEA--PRAP 2109


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +2

Query: 266  LTTNFKFVEVSVADSPDLTEPPYYLKSPGLTGDAKL---VEIGGPPYLVPQVQRDKIYDL 436
            LTT+F ++ + +A +       Y +K+    GDA++   + + G   ++   Q ++ +  
Sbjct: 1735 LTTDFGYISLDIAHTVPEDSGVYSVKASNAKGDAEVQAQLTVTGNAVILGDTQHEQSWQK 1794

Query: 437  AKLLETLEPRTP 472
             +L+E   PR P
Sbjct: 1795 IQLIEA--PRAP 1804


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,900
Number of Sequences: 27780
Number of extensions: 336952
Number of successful extensions: 778
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)