Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M12
(948 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.55
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 30 0.55
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.72
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.72
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.9
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 5.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.1
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 6.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 8.9
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXP 558
PPP PP P M + PPLP S P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAP-PPPLPASSAPSVPNP 1746
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 517 PPLPXSXPPPXPXPSXPXXPP 579
PP P S PPP P P PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPX-PXPSXPXXP 576
PP PPP P P P S PPP P S P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +3
Query: 507 TVXXPPXXLXPPP--PXXPLXPPXPPXP 584
T PP + PPP P P PP P P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 519 PPXXLXPPPPXXPLXPPXPPXPS 587
PP PP P P P PP P+
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPA 1737
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 29.9 bits (64), Expect = 0.55
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 112 MLAXSAGVV--ELSADTSNQDLEEKLYNSILXGDYXSXVRQSLEYESQGKGSII 267
++ +AG+ LS + N+D+ K+ L G Y + ++ QGKGS+I
Sbjct: 91 VMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLI 144
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 448 PXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
P + PPP P S PP+P S PPP + PP
Sbjct: 144 PPRPSIPPPSPA--SAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 466 PPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXP 567
PPP P S A PP S PPP P S P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
PP P +P + + + P P S PP P P PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +1
Query: 448 PXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
P PP P PPLP + P P P P+ P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPL--------PXSXPPPXPXPSXPXXPP 579
P P + PP P S R PPL P + PP P S P PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 469 PPIPRMXSXAXXXRCXPPLPXSXPPPXPXPS 561
PPIP + P L PPP P PS
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPS 260
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXP--PPXPXPSXPXXPP 579
PP P P PPLP P PP P P+ P PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP-PAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +1
Query: 466 PPPIPRMXSXAXXXRCXPPLPXSXPPPXP-XPSXPXXPP 579
PP +P + P LP P P PS P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 415 SDPLTXNXXPPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXP 576
S PL N P PP+P PPLP P P P P P
Sbjct: 90 SKPLL-NELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 469 PPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
PP+P++ S A PLP + PP P PS P
Sbjct: 1012 PPVPKLSSKAPPV----PLPSADAPPIPVPSTAPPVP 1044
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 442 PPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
PP PP+P+ S A P P S P P PS P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 421 PLTXNXXPPPXKXXXPPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPS 561
PL PP PP+P S + P S PPP P PS
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP-SAPPPVPAPS 1070
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 537 PPPPXXPLXPPXPP 578
PPPP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +1
Query: 415 SDPLTXNXXPPPXKXXXPPPIPRMXSXAXXXRCXPPL--PXSXPPPXPXPSXPXXPP 579
+DPL PPP PP R L + PPP PS P PP
Sbjct: 232 ADPLPA--PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 543 PPXXPLXPPXPPXPS 587
PP PL PP PP P+
Sbjct: 806 PPPAPLPPPAPPLPT 820
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 4/28 (14%)
Frame = +3
Query: 519 PPXXLXPPPPXX----PLXPPXPPXPSH 590
PP PPPP P PP PP P +
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGY 32
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 578 GGXWGXEGXGXGGGXEXGRGGXHRXXXAXLXIRGIGGGXXXFXGG 444
GG G G GGG RGG A G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -2
Query: 575 GXWGXEGXGXGGGXEXGRGGXHRXXXAXLXIRGIGGGXXXFXGG 444
G G G G GG GRGG RG GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 466 PPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPSXPXXPP 579
PPP P A P P PPP P P PP
Sbjct: 732 PPPPP----PAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 466 PPPIPRMXSXAXXXRCXPPLPXSXPPPXPXPS 561
PPP+PR+ P P P P PS
Sbjct: 514 PPPVPRLSITRSQVSREPEKPEEIPSVPPLPS 545
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,041,048
Number of Sequences: 5004
Number of extensions: 30002
Number of successful extensions: 165
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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