Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M11
(1067 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 5e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.018
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.069
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.069
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.47
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 30 0.48
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.48
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.64
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 24 3.5
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 5.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 5.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 43.6 bits (98), Expect = 5e-05
Identities = 19/47 (40%), Positives = 19/47 (40%)
Frame = +3
Query: 525 SXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPDXXXXXXP 665
S PPPPPPP G PL P PPPPP P P
Sbjct: 332 SNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 40.7 bits (91), Expect = 3e-04
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 540 PPPPPPPXXRXXGRRPL-XPSXPXXXPPPPPP 632
PPPPPPP R G+ P+ S PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/102 (27%), Positives = 32/102 (31%), Gaps = 2/102 (1%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRR--PLXPSXPXXXPPPPPPHXPDXX 650
P P + L P + PPPPPP GR+ PL S PP PPP P
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP--- 396
Query: 651 XXXXPXXPXXXXXXXXXXXXXXXXXXXXPPPPXRXPAPXPPT 776
P P P P P PP+
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPS 438
Score = 30.3 bits (65), Expect = 0.48
Identities = 25/99 (25%), Positives = 26/99 (26%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPDXXXX 656
P P P PS PPP PP P P+ P P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP--PNSP-PRPIAPVSMNPAINST 287
Query: 657 XXPXXPXXXXXXXXXXXXXXXXXXXXPPPPXRXPAPXPP 773
P P PPPP R PP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
Score = 29.9 bits (64), Expect = 0.64
Identities = 25/98 (25%), Positives = 28/98 (28%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPDXXXX 656
P+ P P L + + PP P P PS P PP PP P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTP-----------PSLPPSAPPSLPPSAPPSLPM 441
Query: 657 XXPXXPXXXXXXXXXXXXXXXXXXXXPPPPXRXPAPXP 770
P P PP P PAP P
Sbjct: 442 GAPAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 28.3 bits (60), Expect = 1.9
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
PS P P +P+ PP P G P P PPP P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +3
Query: 471 LLPSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPDXX 650
L PS P AP P PP PP PL P P PP P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP---PLPAGMPAAPPLPPAAPAPPPA 479
Query: 651 XXXXPXXP 674
P P
Sbjct: 480 PAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.022
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 519 SPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
+P+ P PPP P P P PPPPPP P
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.052
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 540 PPPPPPPXX---RXXGRRPLXPSXPXXXPPPPPPHXPDXXXXXXPXXP 674
PPPPPP P+ P P PPPPP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.5 bits (73), Expect = 0.052
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 486 PXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
P P +P PPPPPPP G P PPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP---------PPPPPP 783
Score = 29.5 bits (63), Expect(2) = 0.018
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 540 PPPPPPPXXRXXGRRPLXPSXPXXXPPP 623
PPPPPPP G R P+ P P P
Sbjct: 777 PPPPPPPAVSAGGSRYYAPA-PQAEPEP 803
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 522 PSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
P+ P P PPP G P P PPPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 24.2 bits (50), Expect(2) = 0.018
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPPPPPPP 560
P P P P PPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 522 PSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
P PPPPP P P+ P PPPP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +1
Query: 997 PPPXPR---PPPXXPXXXXXPPXAP 1062
PPP P PPP P PP AP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.069
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +3
Query: 540 PPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
PPPPPPP G P PS P PPPPPP
Sbjct: 9 PPPPPPP----PGFEP--PSQP---PPPPPP 30
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 997 PPPXPRPPPXXPXXXXXPPXAP 1062
PPP P PP P PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 597 SXPXXXPPPPPP 632
S P PPPPPP
Sbjct: 3 SLPPGNPPPPPP 14
Score = 20.6 bits (41), Expect(2) = 6.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 735 PPPPXRXPAPXPP 773
PPPP P PP
Sbjct: 13 PPPPGFEPPSQPP 25
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect(2) = 0.53
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 540 PPPPPPPXXRXXGRRPLXPS 599
PPPPPPP G + + P+
Sbjct: 947 PPPPPPPLVSAAGGKFVSPA 966
Score = 22.6 bits (46), Expect(2) = 0.53
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 522 PSXQXXPPPPPP 557
P+ PPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 22.6 bits (46), Expect(3) = 0.47
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 603 PXXXPPPPPP 632
P PPPPPP
Sbjct: 942 PAFPPPPPPP 951
Score = 22.6 bits (46), Expect(3) = 0.47
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 615 PPPPPPHXP 641
PPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 21.4 bits (43), Expect(3) = 0.47
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 522 PSXQXXPPPPPPP 560
P+ P PPPPP
Sbjct: 899 PTIITHPTPPPPP 911
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 519 SPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPP 623
+P Q PPPPPP P P+ P P P
Sbjct: 348 TPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.48
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 477 PSXPXXXXXXAPXLSPSXQXXPP--PPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
PS P AP + P PPP P PS P PP PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +3
Query: 510 PXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPDXXXXXXPXXP 674
P +P PPP P + P PS PPP P P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPS---SLPPPAQPAAPVKSPPSAPSLP 191
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.64
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 673 GXXGXXXXXXSGXWGGGGGGXXXGXXGXXGRRPXXRXXGGGGGGGXXWXEGERXGA 506
G G G GG GG G G G R GG GG G + GA
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -2
Query: 673 GXXGXXXXXXSGXWGGGGGGXXXGXXGXXGRRPXXRXXGGGGGGGXXWXEGERXGA 506
G G G G GGG G G R R GG GG G R GA
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGGRGGSSGGRGGA 67
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 486 PXXXXXXAPXLS-PSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXPD 644
P AP +S P+ PPP P L PPPPPP D
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVED 201
Score = 23.8 bits (49), Expect(2) = 1.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 540 PPPPPPP 560
PPPPPPP
Sbjct: 238 PPPPPPP 244
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 615 PPPPPPHXP 641
PPPPPP P
Sbjct: 239 PPPPPPTLP 247
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = -2
Query: 673 GXXGXXXXXXSGXWG--GGGGGXXXGXXGXXGRRPXXRXXGGGGGGGXXW 530
G G G G GGG G G G G P G GG GG W
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +3
Query: 474 LPSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
+PS P +PS P P P +RP P P P PP P
Sbjct: 586 VPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +3
Query: 474 LPSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
+PS P +PS P P P +RP P P P PP P
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAP 671
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = +3
Query: 465 SXLLPSXPXXXXXXAPXLSPSXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPPHXP 641
S + PS P +PS P P P +RP P P P P P
Sbjct: 508 SVITPSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVP 566
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 540 PPPPPPP 560
PPPPPPP
Sbjct: 307 PPPPPPP 313
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 507 APXLSPSXQXXPPPPPPP 560
AP S PPPPPP
Sbjct: 294 APSSGDSANGGLPPPPPP 311
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 615 PPPPPPHXP 641
PPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 21.4 bits (43), Expect(2) = 4.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 615 PPPPPPHXPD 644
PPPPPP D
Sbjct: 308 PPPPPPPSND 317
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.8 bits (49), Expect(2) = 5.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 540 PPPPPPP 560
PPPPPPP
Sbjct: 1095 PPPPPPP 1101
Score = 21.0 bits (42), Expect(2) = 5.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 615 PPPPPP 632
PPPPPP
Sbjct: 1097 PPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 540 PPPPPPP 560
PPPPPPP
Sbjct: 370 PPPPPPP 376
Score = 21.0 bits (42), Expect(2) = 5.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 615 PPPPPP 632
PPPPPP
Sbjct: 372 PPPPPP 377
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 525 SXQXXPPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
S Q PPPPPP G P + PP PP
Sbjct: 1877 SNQAAPPPPPPMALPKAG--PPSAAPTSALPPAGPP 1910
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 540 PPPPPPPXXRXXGRRPLXPSXPXXXPPPPPP 632
PPPP PP R R S P PP
Sbjct: 222 PPPPAPPKPRRLAARTSSNSSGVSSPTSVPP 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,670,155
Number of Sequences: 5004
Number of extensions: 23073
Number of successful extensions: 320
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 563206452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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