Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M10
         (1415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    31   2.6  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +2

Query: 716 RXXXXGXXXPPPPRLPXXPRXXXPGXXXPXXXPXSPXXP 832
           R    G   PPPP  P  PR   P    P   P +P  P
Sbjct: 129 RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167



 Score = 30.7 bits (66), Expect = 2.6
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +2

Query: 713 SRXXXXGXXXPPPPRLPXXPRXXXPGXXXPXXXPXSP 823
           SR        PPPPR+P  P    P    P   P SP
Sbjct: 131 SRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,833,028
Number of Sequences: 27780
Number of extensions: 27459
Number of successful extensions: 75
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4027384386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)