Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M09
(922 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 2e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.043
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.057
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.23
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +1
Query: 757 PHPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPP 906
P P A + P + AP P P + PPPP PP PPPPP PP
Sbjct: 734 PPPPAVIVPTP-APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +1
Query: 814 PXPXRLXXTPPPPXA----PPXXPLXXPPPPPXPP 906
P P P P A PP P+ PPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +1
Query: 829 LXXTPPPP----XAPPXXPLXXPPPPPXPPXXXPP 921
L +PPPP P P P PPP P PP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 11/47 (23%)
Frame = +1
Query: 814 PXPXRLXXTPPP---PXAPPXXPLXXPPPPPXPP--------XXXPP 921
P P + TP P P PP + PPPPP PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 787 PGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
P P P P P PP AP PPPPP PP
Sbjct: 737 PAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 6/42 (14%)
Frame = +1
Query: 814 PXPXRLXXTPPPPXAPPXXPLXXPPPP------PXPPXXXPP 921
P P PPP P PPPP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 760 HPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
HP++ P S AP P TPPPP P PP P PP PP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAP-----TPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 787 PGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXP--PPPPXPPXXXP 918
P AP P P + PPPP APP P P PPPP P P
Sbjct: 1700 PQMSAPTPPPPPMSV---PPPPSAPP-MPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 820 PXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
P TPP P P PP PP PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP 1716
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.043
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +1
Query: 814 PXPXRLXXTPPP---PXAPPXXPLXXPPPPPXPP 906
P P L + PP P APP P+ P PP PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 33.1 bits (72), Expect = 0.057
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 760 HPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPP--PPPXPP 906
+P A PG AP P + PP PP P PP PP PP
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 31.1 bits (67), Expect = 0.23
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Frame = +1
Query: 757 PHPLAXLSXFPGSXAPXXXPX-PXRLXXTPP-PPXAP--PXXPLXXPPPPPXPPXXXPP 921
P P + P S P P P PP PP AP P P P PP PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 799 APXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXP 918
AP P P PP P P P P P PP P
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 799 APXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXP 903
AP P P + PP P A P P P P P
Sbjct: 453 APIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = +1
Query: 829 LXXTPPPPXAPPXXPLXXPP-----PPPXPPXXXP 918
L PPPP + + PP PPP PP P
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 814 PXPXRLXXTPPPPXAPPXXPLXXPPPPPXPP 906
P P + + PP P L P PPP PP
Sbjct: 231 PIPPSIPSSRPPERVP---SLSAPAPPPIPP 258
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 787 PGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPP 897
P S A P P + PPPP P P PPP
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPP-PPRSAPSTGRQPPP 378
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.057
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 841 PPPPXAPPXXPLXXPPPPPXPP 906
PPPP PP PPPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 871 PLXXPPPPPXPPXXXPP 921
P PPPPP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 844 PPPXAPPXXPLXXPPPPPXPPXXXPP 921
PP PP P PP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 787 PGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
P S P + PPP APP PP PP PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +1
Query: 757 PHPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXP-PXXXPP 921
P P + + P P P + P P A P P PP P P PP
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +1
Query: 799 APXXXPXPX-RLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
AP P P + P P APP PP P P PP
Sbjct: 1062 APPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +1
Query: 757 PHPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXP--PPPPXPPXXXPP 921
P P A + P P P PPP P P PP P P PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 793 SXAPXXXPXPXRLXXTPPPPXAPPXXPL-XXPPPPPXPPXXXPP 921
S A P P P P A P P+ PP P P PP
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 793 SXAPXXXPXPXRLXXTPPPPXAPPXXPL-XXPPPPPXPPXXXPP 921
S A P P P P A P P PP P P PP
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 793 SXAPXXXPXPXRLXXTPPPPXAPPXX-PLXXPPPPPXPPXXXPP 921
S AP P P APP P PP P P PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +1
Query: 793 SXAPXXXPXPXRLXXTPPPPXAPPXXPLXXP--PPPPXPPXXXPP 921
S A P P P P A P P PP P P PP
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 814 PXPXRLXXTPP--PPXAPPXXPLXXPPPPPXPPXXXPP 921
P P + P PP A P P+ PP P P PP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +1
Query: 757 PHPLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPPPXPPXXXPP 921
P P + L + P P P P APP PP P P PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +1
Query: 763 PLAXLSXFPGSXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPP-PPPXPPXXXP 918
P A P S P R PP P + P P PP P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Frame = +1
Query: 793 SXAPXXXPXPXRLXXTPPPPXAPPXXPLXXPPPP---PXPPXXXPP 921
S AP P P PP + P P PP P P P PP
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Frame = +1
Query: 787 PGSXAPXXXPXPXRLXXTPPP--PXAP----PXXPLXXPPPPPXPPXXXPP 921
P S P P PPP P AP P P PP PP PP
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 847 PPXAPPXXPLXXPPPPPXPPXXXPP 921
PP P P PPP PP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +1
Query: 844 PPPXAPPXX-PLXXPPPPPXPPXXXP 918
PP P PL PPPPP PP P
Sbjct: 224 PPTYTPKQADPLPAPPPPP-PPTLPP 248
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +1
Query: 844 PPPXAPPXXPLXX---PPPPPXPP 906
PP A P L PPPPP PP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,256,219
Number of Sequences: 5004
Number of extensions: 35726
Number of successful extensions: 333
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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