Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M07
(1174 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 37 0.027
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.19
06_01_0973 + 7530436-7530510,7530566-7531297 31 2.3
06_01_0178 + 1386981-1387505 30 3.1
01_01_0929 - 7344911-7345978 24 8.3
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 29 9.4
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 9.4
02_05_0686 - 30900748-30902167,30903442-30904742 25 9.9
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 37.1 bits (82), Expect = 0.027
Identities = 24/101 (23%), Positives = 25/101 (24%)
Frame = +1
Query: 844 PPPPPPXXXXXXXXXXXXXXPXPXPXXXXXXXXXXXXXXXFXXXXXXGXRAPPPPPXXXX 1023
PPPPPP P P P PPPPP
Sbjct: 567 PPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Query: 1024 XXXXXFLFXXXXXPPPPPXXFXXXXPPXXXXLXFLXSXPPP 1146
L PPPP PP + PPP
Sbjct: 627 LPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPP 667
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 996 PPPPPXXXTXXXXLFSXXXXXXPPPPP 1076
PPPPP + FS PPPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 997 PPPPPXXXXXXXXXFLFXXXXXPPPPPXXFXXXXPPXXXXLXFLXSXPPP 1146
PPPPP F PPPPP PP + S PPP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP-------PPPLPQSNYASSQPPP 587
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/104 (21%), Positives = 24/104 (23%)
Frame = +1
Query: 835 KKXPPPPPPXXXXXXXXXXXXXXPXPXPXXXXXXXXXXXXXXXFXXXXXXGXRAPPPPPX 1014
+ PPPPPP P P P PPPPP
Sbjct: 615 RSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGI-GNKFPAPPPPPPPPR 673
Query: 1015 XXXXXXXXFLFXXXXXPPPPPXXFXXXXPPXXXXLXFLXSXPPP 1146
PPPPP + PPP
Sbjct: 674 SSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPP 717
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/87 (22%), Positives = 20/87 (22%)
Frame = +1
Query: 844 PPPPPPXXXXXXXXXXXXXXPXPXPXXXXXXXXXXXXXXXFXXXXXXGXRAPPPPPXXXX 1023
PPPPPP P P P P PPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
Query: 1024 XXXXXFLFXXXXXPPPPPXXFXXXXPP 1104
PPPPP PP
Sbjct: 609 PPILPNRSVPPPPPPPPPLPNHSVLPP 635
Score = 29.1 bits (62), Expect = 7.1
Identities = 24/101 (23%), Positives = 24/101 (23%)
Frame = +1
Query: 844 PPPPPPXXXXXXXXXXXXXXPXPXPXXXXXXXXXXXXXXXFXXXXXXGXRAPPPPPXXXX 1023
PPPPPP P P P APPPPP
Sbjct: 713 PPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAP 772
Query: 1024 XXXXXFLFXXXXXPPPPPXXFXXXXPPXXXXLXFLXSXPPP 1146
PPPPP P PPP
Sbjct: 773 K-------PPGTVPPPPPLHGASGRPHPPSSKGLNAPAPPP 806
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 34.3 bits (75), Expect = 0.19
Identities = 34/136 (25%), Positives = 35/136 (25%), Gaps = 4/136 (2%)
Frame = -3
Query: 1145 GGGXEXRXXXXXXXGGXXXXXXXGGGGGXXXXXXRKXXXXXXXXXGGGGGA---RXPXXX 975
GG E GG GGGGG R+ GGGGG P
Sbjct: 256 GGALECEIGGGGGGGGTDRNKGGGGGGGGALENAREDGAEGGGGGGGGGGGGGHGAPELG 315
Query: 974 F-XXKXXXXXXXXXXXXXGXGXGXGXKXXXXXXXXXXXXGGGGGGXFFXXQXXKKKKXGX 798
F G G G GGGGGG K G
Sbjct: 316 FSGGGGGGGGGEIAGTVDLRGGGGGAGGVFPPTPDLGGGGGGGGGGTKVRVCAPKDISGG 375
Query: 797 XXXGGXXXXPPPPXGG 750
GG P GG
Sbjct: 376 GGGGGGMLDKPDEAGG 391
>06_01_0973 + 7530436-7530510,7530566-7531297
Length = 268
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 860 GGGGGGXFFXXQXXKKKKXGXXXXGGXXXXPPPPXG 753
GGGGGG + + K++K GG PPPP G
Sbjct: 186 GGGGGGIWAGAEGGKEEK----GRGGRVGGPPPPRG 217
>06_01_0178 + 1386981-1387505
Length = 174
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 1145 GGGXEXRXXXXXXXGGXXXXXXXGGGGGXXXXXXRKXXXXXXXXXGGGGG 996
GGG GG GGGGG RK GGGGG
Sbjct: 47 GGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGG 96
>01_01_0929 - 7344911-7345978
Length = 355
Score = 24.2 bits (50), Expect(2) = 8.3
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = +1
Query: 835 KKXPPPPPPXXXXXXXXXXXXXXPXPXP 918
++ PPPPPP P P P
Sbjct: 31 RRPPPPPPPFCPHLSVPCVGLPLPPPCP 58
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 832 KKKXPPPPPP 861
K + PPPPPP
Sbjct: 29 KTRRPPPPPP 38
>04_04_0137 - 23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 996 PPPPPXXXTXXXXLFSXXXXXXPPPPP 1076
PPPPP T + + PPPPP
Sbjct: 373 PPPPPPAVTQQQDVKTSCGPAVPPPPP 399
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 990 ARPPPPPXXXTXXXXLFSXXXXXXPPPPP 1076
A+PPPPP + PPPPP
Sbjct: 34 AKPPPPPSPRANGTAAAAKPSASPPPPPP 62
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 838 KXPPPPPPXXXXXXXXXXXXXXPXPXP 918
K PPPPPP P P P
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Score = 22.2 bits (45), Expect(2) = 9.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 835 KKXPPPPPP 861
K PPPPPP
Sbjct: 333 KAAPPPPPP 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,353,431
Number of Sequences: 37544
Number of extensions: 637543
Number of successful extensions: 6403
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5618
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3584899172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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