Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M06
         (987 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical pr...    39   0.005
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho...    38   0.008
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi...    38   0.008
Z68014-2|CAA92024.1|  565|Caenorhabditis elegans Hypothetical pr...    31   1.7  
AF038611-7|AAB92040.1|  466|Caenorhabditis elegans Hypothetical ...    29   6.7  

>Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical
           protein K06A4.3 protein.
          Length = 475

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 221 PAFANVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSXXXL 346
           PA A +G+  G+ +WRI  F   PV   D G FY GD+   L
Sbjct: 8   PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIAL 49


>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
           homolog protein.
          Length = 1257

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 233 NVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSXXXLRTTSDSSXQ 373
           +VG   G+ +W I+NF P  +     G+FY  D+   L+TT ++S Q
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQ 549


>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
           flightless) homologprotein 1 protein.
          Length = 1257

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 233 NVGRTAGVQIWRIQNFEPIPVAXKDIGKFYKGDSXXXLRTTSDSSXQ 373
           +VG   G+ +W I+NF P  +     G+FY  D+   L+TT ++S Q
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQ 549


>Z68014-2|CAA92024.1|  565|Caenorhabditis elegans Hypothetical
           protein W04G3.2 protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 292 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 188
           G W++V+YSP + TG CS    K   D G  TG  +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437


>AF038611-7|AAB92040.1|  466|Caenorhabditis elegans Hypothetical
           protein E04A4.6 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 236 VGRTAGVQIWRIQNFEPIPVAXKDIGKFYKG 328
           VG  AG Q +R++   P+P A   +G  Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,019
Number of Sequences: 27780
Number of extensions: 258637
Number of successful extensions: 555
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)