Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M05
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.042
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.042
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.042
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.056
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.056
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.056
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.68
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.68
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.68
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 32 0.68
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 0.90
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.90
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.4
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSP---PXPPXPRPXRXXXXGXXXPPKGG 875
PP PPG G P P P P P PP P P G PP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPS---PP----XPPXPRPXRXXXXGXXXPPKGGXXVXP 890
PP PPG G P P P PP PP P P PP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSP---PXPPXPRPXRXXXXGXXXPPKGG 875
PP PPG G P P P P P PP P P G PP G
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPS---PP----XPPXPRPXRXXXXGXXXPPKGGXXVXP 890
PP PPG G P P P PP PP P P PP GG P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSP---PXPPXPRPXRXXXXGXXXPPKGG 875
PP PPG G P P P P P PP P P G PP G
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 7/57 (12%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPS---PP----XPPXPRPXRXXXXGXXXPPKGGXXVXP 890
PP PPG G P P P PP PP P P PP GG P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Frame = +3
Query: 726 PAXMXPPXPP--GKRRXXXLGXPXPXPSPPXPPXPRPXR--XXXXGXXXPPKGGXXVXPX 893
PA PP PP G G P P P+ PP PR G PP G P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 894 XXGXXXXXPXXXXAP 938
G P +P
Sbjct: 293 RAGSPPPPPPPRGSP 307
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXR-XXXXGXXXPPKGGXXVXPXXXGXXXXX 917
PP P G G P P PP P P R G PP+ G P G
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Query: 918 P 920
P
Sbjct: 333 P 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Frame = +3
Query: 726 PAXMXPPXPP--GKRRXXXLGXPXPXPSPPXPPXPRPXR--XXXXGXXXPPKGGXXVXPX 893
PA PP PP G G P P P+ PP PR G PP G P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 894 XXGXXXXXPXXXXAP 938
G P +P
Sbjct: 314 RAGSPPPPPPPRGSP 328
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXR-XXXXGXXXPPKGGXXVXPXXXGXXXXX 917
PP P G G P P PP P P R G PP+ G P G
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Query: 918 P 920
P
Sbjct: 354 P 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.056
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Frame = +3
Query: 726 PAXMXPPXPP--GKRRXXXLGXPXPXPSPPXPPXPRPXR--XXXXGXXXPPKGGXXVXPX 893
PA PP PP G G P P P+ PP PR G PP G P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 894 XXGXXXXXPXXXXAP 938
G P +P
Sbjct: 299 RAGSPPPPPPPRGSP 313
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXR-XXXXGXXXPPKGGXXVXPXXXGXXXXX 917
PP P G G P P PP P P R G PP+ G P G
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Query: 918 P 920
P
Sbjct: 339 P 339
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 167 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 334
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 693 QVQXXGVGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPP 866
Q G P + PP PP + + P +PP PP P P G PP
Sbjct: 594 QAPNYGTPENRPHAVPPPPPPPPPQSFGMA-PISSAAPPPPPPPPPMGLPAVGAGAPP 650
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 699 QXXGVGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPP 818
Q G+ A PP PP +G P P PP PP
Sbjct: 618 QSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 693 QVQXXGVGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPP 866
Q G P + PP PP + + P +PP PP P P G PP
Sbjct: 420 QAPNYGTPENRPHAVPPPPPPPPPQSFGMA-PISSAAPPPPPPPPPMGLPAVGAGAPP 476
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 699 QXXGVGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPP 818
Q G+ A PP PP +G P P PP PP
Sbjct: 444 QSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 711 VGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRP 830
VG P PP + + P P PSPP PP P P
Sbjct: 109 VGINNPVQPPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPP 148
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGX-PXPXPSPPXPP 818
P PG+RR G P P PSPP PP
Sbjct: 854 PKKTPGRRRKKDRGASPSPSPSPPPPP 880
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPPK--GGXXVXPXXX 899
P PP PP G P P PP PP P+ PP GG P
Sbjct: 537 PVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
Query: 900 G 902
G
Sbjct: 597 G 597
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXP-XPXPSPPXPPXPRP 830
P PP PP +R G P P PP PP RP
Sbjct: 244 PGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 708 GVGRXFPAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRP 830
G GR P PP PP + P P P P P P+P
Sbjct: 88 GYGR--PQGYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQP 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 714 GRXFPAXMXPPXPPGKRRXXXLGXPXPXPS-PPXPP 818
G +P M PP PP P P PS PP PP
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Frame = +3
Query: 735 MXPPXPPGKRRXXXLGXPXP--XPS------PPXPPXPRPXRXXXXGXXXPP 866
M PP PPG R + P P PS PP PP P G PP
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRP 830
P P PP +R P P PP PP P P
Sbjct: 56 PPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 714 GRXFPAXMXPPXPPGKRRXXXLGXPXPXPS-PPXPP 818
G +P M PP PP P P PS PP PP
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Frame = +3
Query: 735 MXPPXPPGKRRXXXLGXPXP--XPS------PPXPPXPRPXRXXXXGXXXPP 866
M PP PPG R + P P PS PP PP P G PP
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRP 830
PA + PP PP P P P+P PP P P
Sbjct: 86 PAPLPPPPPPAS----PCCGPSPVPAPCCPPPPAP 116
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXR 836
PP PP R+ G P P PP P P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPR 153
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Frame = +2
Query: 692 PGPGGRCGKXFSXXNEXXP-PPGEKAXXXXGXPXPXSLPP*XP---XXPXXPXXXXRXXX 859
PGPGGR GK + P PG P + PP P P P
Sbjct: 122 PGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGE 181
Query: 860 PPKGGXSGXPXIXGXXXEXPXXXXGP 937
P G +G P G P GP
Sbjct: 182 PGGPGPAGSP--AGPSGPGPAGPPGP 205
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPPKG 872
P PP P G P P PP PP P P + G P G
Sbjct: 185 PGPAGPPGPAGPA-GEDAAAPESPPGPPGPPGP-PGKDGEAGAPGAPGG 231
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 173 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 343
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 173 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 343
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPPKGGXXVXPXXXG 902
P P PGK G P P PP PP P+ P K G P G
Sbjct: 206 PGEKGPTGEPGK---VINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPG 261
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/74 (29%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Frame = +2
Query: 692 PGPGGRCGKXFSXXNEXXP-PPGEKAXXXXGXP--XPXSLPP*XPXXPXXPXXXXRXXXP 862
PGP GR G+ + P PPG G P P P P P P P
Sbjct: 116 PGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGP 175
Query: 863 P-KGGXSGXPXIXG 901
G SG + G
Sbjct: 176 QGDAGTSGQDGVPG 189
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 741 PPXPPGKRRXXXLGXPXPXPSPPXPP 818
PP PPG+ P P P PP PP
Sbjct: 259 PPGPPGQDGSGGAAQPGP-PGPPGPP 283
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRPXRXXXXGXXXPPK 869
P M P P R P +PP PP PRP PP+
Sbjct: 346 PTPMQTPMTPSFRGTN--AAQSPANAPPRPPPPRPAAPSVESPIPPPR 391
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSP---PXPPXPRPXR 836
P+ + P PP R P P P P P PP P P +
Sbjct: 540 PSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAK 579
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 726 PAXMXPPXPPGKRRXXXLGXPXPXPSPPXPPXPRP 830
P PP P R P P+PP PP +P
Sbjct: 546 PTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKP 580
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,124,917
Number of Sequences: 27780
Number of extensions: 328591
Number of successful extensions: 2069
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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