Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_M03
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein. 90 9e-18
AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform p... 90 9e-18
AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated dom... 90 9e-18
AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein. 90 9e-18
AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein. 90 9e-18
AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein. 90 9e-18
AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein. 90 9e-18
BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein pr... 89 2e-17
BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a pr... 89 2e-17
AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5 p... 89 2e-17
AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein. 89 2e-17
AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isofor... 89 2e-17
AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isofor... 89 2e-17
AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein. 89 2e-17
AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein. 89 2e-17
AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein. 84 6e-16
AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein. 84 6e-16
AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein. 84 6e-16
AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5... 66 2e-10
AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3 p... 66 2e-10
BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase 3... 61 6e-09
AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase 3... 61 6e-09
AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide kinase-3... 61 6e-09
AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide kinase-3... 61 6e-09
AF125807-1|AAD50639.1| 521|Homo sapiens DNA 5'-kinase/3'-phosph... 61 6e-09
AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein. 61 6e-09
AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein. 48 3e-05
AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform p... 48 3e-05
AY302074-1|AAQ74137.1| 49|Homo sapiens aprataxin variant LP2P3... 48 6e-05
AY302072-1|AAQ74135.1| 49|Homo sapiens aprataxin variant LP2E5... 48 6e-05
AY302070-1|AAQ74133.1| 49|Homo sapiens aprataxin variant LP2P3... 48 6e-05
AY302068-1|AAQ74131.1| 49|Homo sapiens aprataxin variant LP2 p... 48 6e-05
AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein. 47 8e-05
AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein. 47 8e-05
BC002519-1|AAH02519.2| 482|Homo sapiens PNKP protein protein. 37 0.085
AC018766-1|AAF44716.1| 456|Homo sapiens Polynucleotide kinase 3... 33 1.4
>AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein.
Length = 337
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform
protein.
Length = 356
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated domain
histidine-triad like protein protein.
Length = 356
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 90.2 bits (214), Expect = 9e-18
Identities = 39/102 (38%), Positives = 66/102 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
Q+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 115
>BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein
protein.
Length = 292
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a
protein.
Length = 342
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AY302071-1|AAQ74134.1| 192|Homo sapiens aprataxin variant LE5
protein.
Length = 192
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein.
Length = 247
Score = 89.0 bits (211), Expect = 2e-17
Identities = 39/101 (38%), Positives = 65/101 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
Query: 427 LGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+GVN + +D + KD+ ++ G + ++ + +I+EF+
Sbjct: 61 VGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEFE 101
>AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein.
Length = 284
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 513
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 513
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 84.2 bits (199), Expect = 6e-16
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIK 423
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++K
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVK 73
Query: 424 QLGVNASGLDGFALKKDEVYEIGHGSTIEI 513
Q+GVN + +D + KD+ ++ G + +
Sbjct: 74 QVGVNPTSIDSVVIGKDQEVKLQPGQVLHM 103
>AY302073-1|AAQ74136.1| 85|Homo sapiens aprataxin variant LP3E5
protein.
Length = 85
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>AY302069-1|AAQ74132.1| 85|Homo sapiens aprataxin variant LP3
protein.
Length = 85
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQ 426
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+ LKA+C K +V++KQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQ 60
>BC033822-1|AAH33822.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AY133033-1|AAM82170.1| 521|Homo sapiens polynucleotide kinase
3'-phosphatase protein.
Length = 521
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AF354258-1|AAK57340.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AF126486-1|AAD51135.1| 521|Homo sapiens polynucleotide
kinase-3'-phosphatase protein.
Length = 521
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AF125807-1|AAD50639.1| 521|Homo sapiens DNA
5'-kinase/3'-phosphatase protein.
Length = 521
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AF120499-1|AAD47379.1| 398|Homo sapiens DEM1 protein protein.
Length = 398
Score = 60.9 bits (141), Expect = 6e-09
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Frame = +1
Query: 292 PIKLPHNVQ-IIVGRNKETKIKDQSCSRQQLSLKADCEKCHVEIKQLGVNASGLDGFALK 468
PI LP + Q +++GR T++ D+ CSR Q+ L AD E V +KQLGVN S LK
Sbjct: 21 PIFLPSDGQALVLGRGPLTQVTDRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELK 80
Query: 469 KDEVYEIGHGSTIEILLNNHVHILEFDPPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXX 648
+G G T+ ++ N +H LT +T + + D+
Sbjct: 81 PGLEGSLGVGDTLYLV--NGLH---------PLTLRWEETRTPESQPDTPPGTPLVSQDE 129
Query: 649 XXXXXXXXXXXXVIXXMWDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 130 KRDAELPKKRMRKSNPGWENLE--KLLVFTAAGVKPQGKVAGFDLDGTL 176
>AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein.
Length = 302
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 378
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 58
>AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform
protein.
Length = 302
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 244 IMSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 378
+M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 14 VMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 58
>AY302074-1|AAQ74137.1| 49|Homo sapiens aprataxin variant LP2P3E5
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 381
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302072-1|AAQ74135.1| 49|Homo sapiens aprataxin variant LP2E5
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 381
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302070-1|AAQ74133.1| 49|Homo sapiens aprataxin variant LP2P3
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 381
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY302068-1|AAQ74131.1| 49|Homo sapiens aprataxin variant LP2
protein.
Length = 49
Score = 47.6 bits (108), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQL 381
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ+
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQV 45
>AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein.
Length = 288
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 378
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 44
>AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein.
Length = 193
Score = 47.2 bits (107), Expect = 8e-05
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 247 MSRLCFLRCLLDTHAPIKLPHNVQIIVGRNKETKIKDQSCSRQQ 378
M R+C+L H I+LPH +++GR ETKI D+ CSRQQ
Sbjct: 1 MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQ 44
>BC002519-1|AAH02519.2| 482|Homo sapiens PNKP protein protein.
Length = 482
Score = 37.1 bits (82), Expect = 0.085
Identities = 38/142 (26%), Positives = 56/142 (39%)
Frame = +1
Query: 370 RQQLSLKADCEKCHVEIKQLGVNASGLDGFALKKDEVYEIGHGSTIEILLNNHVHILEFD 549
+ + L AD E V +KQLGVN S LK +G G T+ ++ N +H
Sbjct: 9 QSSVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTLYLV--NGLH----- 61
Query: 550 PPPESLTTSQNQTFXRKLEDDSTSXRXXXXXXXXXXXXXXXXXXXVIXXMWDDIXXGXLY 729
LT +T + + D+ W+++ L
Sbjct: 62 ----PLTLRWEETRTPESQPDTPPGTPLVSQDEKRDAELPKKRMRKSNPGWENLEK--LL 115
Query: 730 VFTAXGVKSXDQIXSFDMDGTL 795
VFTA GVK ++ FD+DGTL
Sbjct: 116 VFTAAGVKPQGKVAGFDLDGTL 137
>AC018766-1|AAF44716.1| 456|Homo sapiens Polynucleotide kinase
3'-phosphatase, partial sequence protein.
Length = 456
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 700 WDDIXXGXLYVFTAXGVKSXDQIXSFDMDGTL 795
W+++ L VFTA GVK ++ FD+DGTL
Sbjct: 82 WENLEK--LLVFTAAGVKPQGKVAGFDLDGTL 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,725,460
Number of Sequences: 237096
Number of extensions: 1660741
Number of successful extensions: 2564
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2564
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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