Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M02
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0041 + 40688242-40688278,40688396-40688502,40688612-406887...    32   0.72 
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720...    29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  

>01_07_0041 +
           40688242-40688278,40688396-40688502,40688612-40688707,
           40688859-40688915,40689033-40689194,40689310-40689394,
           40689648-40689738,40689813-40689977,40690121-40690240,
           40690330-40690402,40690482-40690650,40690741-40691651,
           40691839-40691931,40692065-40692255,40692343-40692455,
           40692757-40692783,40693915-40693949
          Length = 843

 Score = 31.9 bits (69), Expect = 0.72
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 586 WXNPTGLXRXXGVSPWKL-PRALSCFXPWPLTGIPVP-PXSPSGKP 717
           W  P+ + R   VSPWK+ P +     P PL+ +  P P +P   P
Sbjct: 334 WDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSRVKRPRPNAPPASP 379


>11_05_0004 -
           18269416-18269473,18270319-18270509,18271061-18272004,
           18272083-18272254,18272332-18272407,18272498-18272617,
           18272795-18272959,18273048-18273138,18273673-18273757,
           18273873-18274043,18274151-18274207,18274290-18274385,
           18275223-18275365,18275464-18275530
          Length = 811

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 586 WXNPTGLXRXXGVSPWKLPRALSCFXPWPLTGIPVP 693
           W   + + R   VSPW++  A+S   P P+  +PVP
Sbjct: 360 WDEASSIPRPERVSPWQIEPAVS---PPPVNPLPVP 392


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,988,981
Number of Sequences: 37544
Number of extensions: 372245
Number of successful extensions: 1006
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)