Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_M02
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    31   1.7  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.8  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.8  

>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = +2

Query: 455  TQERTCEPKGSKRPGTVQXPRCWRFSIGS-APLTSITKIDAQVRXGXTRXDYXDXXAFPP 631
            + + +C+P  +++P T   P C+  S  S  P T  T    +   G T  D       PP
Sbjct: 776  SSDPSCQPPTTRKPITTPKPNCYPGSTDSRCPQTPRTTQQPRCYPGSTDPDCQPATYLPP 835

Query: 632  GSSLVRSPVSXPGXLPG 682
             ++      + P   PG
Sbjct: 836  TTARTTITTAKPRCYPG 852



 Score = 31.5 bits (68), Expect = 1.7
 Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
 Frame = +2

Query: 458  QERTCEPKGSKRPGTVQXPRCWRFSIGS-APLTSITKIDAQVRXGXTRXDYXDXXAFPPG 634
            Q  T  P  ++ P T + P C+  S  S  P T  T I  +   G T  D       PP 
Sbjct: 1727 QPTTNLPPTTRTPVTTRKPNCYPGSTDSRCPQTPQTTIRPKCYPGSTDPDCQPTTNLPPS 1786

Query: 635  SSLVRSPVSXPGXLPG 682
            +     P + P   PG
Sbjct: 1787 TPRPTVPTTQPRCYPG 1802


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 302 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 397
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 302 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 397
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,698,235
Number of Sequences: 53049
Number of extensions: 591380
Number of successful extensions: 1569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)