Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L24
(1066 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 33 1.3
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 33 1.3
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 3.1
BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein. 31 5.4
BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif prote... 31 5.4
AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif prote... 31 5.4
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote... 31 5.4
AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif prote... 31 5.4
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote... 31 5.4
AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens ... 31 5.4
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 7.1
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 33.5 bits (73), Expect = 1.3
Identities = 26/89 (29%), Positives = 30/89 (33%)
Frame = +2
Query: 779 PXXXXXXPPXQRLPPXXXXSXSXXPXXPPXPLXPXXWXXHPHHXSPXPXXIXPNPXLXPM 958
P PP +PP P PP P P + HP +P P + P P
Sbjct: 448 PAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPS-FPPHPDFAAPPP--LPPPPA---- 500
Query: 959 RXSXXADLXXXPXXXLLXPTRAXXXPPTP 1045
AD P L PTR PP P
Sbjct: 501 -----ADYPTLPPPPLSQPTRGAPPPPPP 524
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 33.5 bits (73), Expect = 1.3
Identities = 26/89 (29%), Positives = 30/89 (33%)
Frame = +2
Query: 779 PXXXXXXPPXQRLPPXXXXSXSXXPXXPPXPLXPXXWXXHPHHXSPXPXXIXPNPXLXPM 958
P PP +PP P PP P P + HP +P P + P P
Sbjct: 319 PAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPS-FPPHPDFAAPPP--LPPPPA---- 371
Query: 959 RXSXXADLXXXPXXXLLXPTRAXXXPPTP 1045
AD P L PTR PP P
Sbjct: 372 -----ADYPTLPPPPLSQPTRGAPPPPPP 395
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 32.3 bits (70), Expect = 3.1
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPPXVSXXXXHXXESXPXXYALXXXR* 978
PP P P P P+P P PPP + P AL
Sbjct: 15 PPGLPPLPGPKGGFEPGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFA-ALPPPPP 73
Query: 979 PXPPPXXXSPPXHP 1020
P PPP PP P
Sbjct: 74 PPPPPPPQQPPPPP 87
>BC111697-1|AAI11698.1| 983|Homo sapiens RBM26 protein protein.
Length = 983
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 348 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>BC041655-1|AAH41655.1| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 348 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL159974-2|CAI12923.3| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 348 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 349 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 384
>AL139006-2|CAI95137.2| 980|Homo sapiens RNA binding motif protein
26 protein.
Length = 980
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 348 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 383
>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
26 protein.
Length = 1008
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 349 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 384
>AK027456-1|BAB55125.1| 680|Homo sapiens protein ( Homo sapiens
cDNA FLJ14550 fis, clone NT2RM2001696. ).
Length = 680
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 799 PPXPAXXPXXXXLXXPXPXPSPXPXXXXXMXXTPPP 906
PP P P L P P P P P + PPP
Sbjct: 45 PPPPILTPPPVNLRPPVPPPGPLPPSLPPVTGPPPP 80
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.1 bits (67), Expect = 7.1
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +3
Query: 636 LXPXSSXXPXXPPXPXSPX-LXRXPRXXXXXXXXAXPTXLAXPLXXXSYXXXPXXPPRAS 812
L P S P PP P P L P P ++ PL P PP
Sbjct: 1947 LYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAP-----PPTPPPPP 2001
Query: 813 XXPXXPXXPXPXPXP 857
P P P P P P
Sbjct: 2002 PPPPPPPPPPPPPPP 2016
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,051,245
Number of Sequences: 237096
Number of extensions: 1107577
Number of successful extensions: 5828
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4823
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14539514738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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