Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L22
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.012
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.047
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.19
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 0.48
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 0.62
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.3
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 7.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 9.4
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.012
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 469 PPPPPXGXXXXXRXXXXXXXXXGPXLXGPPXPPPPPXXPXGG 344
PPPPP P + GPP PPPPP G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG 774
Score = 30.7 bits (66), Expect = 0.33
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +2
Query: 389 PEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPPXGGGG 520
P P PPPP P P G P P P PPP GG
Sbjct: 752 PPPAPIMGGPPPPPPP----PGVAGAGPPPP--PPPPPAVSAGG 789
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 386 APEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPPXGGGG 520
+P PP+ P P P P P P PPPP G G
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPA---PIMGGPPPPPPPPGVAG 772
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 385 PPXPPPPPXXPXGG 344
PP PPPPP GG
Sbjct: 776 PPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 388 GPPXPPPPPXXPXGG 344
GPP PPPPP G
Sbjct: 774 GPPPPPPPPPAVSAG 788
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 519 PPPPXGGGGXGXXGXXGXPPPPA 451
PPPP G G PPPPA
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPA 784
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.047
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 504 GGGGXGXXGXXGXPPP-PAGXXXXXGXGGGGXXLGG 400
GGG G G G PPP P G G GG G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGG 222
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 557 GGXGAXGGXXXXPPPPPXGGGXXXXXGXXAXPPPXRGG 444
GG G GG PPP P G G G GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG 225
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 749 PPXXGXAAGXGGXGRGGXGXGGRGXXG 669
PP G G GG G G GG G G
Sbjct: 201 PPGPGGFGGFGGFGGEGHHHGGHGGFG 227
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 386 APEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPP 505
A + RPP PPPP P G G P PPPP
Sbjct: 306 ANKKRPPP--PPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = +1
Query: 448 PRXGGGXAXXPXXXXXPPPXGGGGGXXXXPP---XAPXPPXPR 567
P G G + PPP G PP AP PP PR
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 389 PEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPP 505
P P + PP P PAG P P PPP
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 898 PXPPAXGPXAXXAXXPXXGRAXPPXPP 978
P PP A P GR+ PP PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPP 365
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 670 PXXPRPPXPXPPRPXPPXPAAXPXXGG 750
P P P PP PP P+A P G
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 670 PXXPRPPXPXPPRP-XPPXPAAXP 738
P P PP PP P PP PA P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.1 bits (57), Expect(2) = 0.48
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 430 PSXXXPPRXGGGXAXXPXXXXXPPPXGGGGGXXXXPPXAPXPPXP 564
P PP+ P PPP PP AP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPP--SAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +2
Query: 401 PPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPP 505
PP P P P P P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 21.4 bits (43), Expect(2) = 0.48
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +1
Query: 670 PXXPRPPXPXPPRPXPPXP 726
P P PP P P P P
Sbjct: 1728 PSAPPPPLPASSAPSVPNP 1746
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 383 GAPEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPPXG 511
G P PPS PP P P P P P P P G
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPV----PPPSTAPPVPTPSAG 1225
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 383 GAPEXRPPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPP 502
G P PPS PP P P P P P P P
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPV---PVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 9.4
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Frame = +2
Query: 386 APEXRPPSXXPPPPXP--XXXXXPAGGGGXPXXP-----XXPXPPP 502
AP PS PP P P PA G P P P PPP
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 25.0 bits (52), Expect(2) = 0.62
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +1
Query: 430 PSXXXPP--RXGGGXAXXPXXXXXPPPXGGGGGXXXXPPXAPXPPXP 564
PS PP + G P PP G PP + PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 661 PRXPXXPRPPXPXPPRPXPPXP 726
P P PP P P PP P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVP 1230
Score = 23.0 bits (47), Expect(2) = 0.62
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 670 PXXPRPPXPXPPRPXPPXPA 729
P PP P P PP PA
Sbjct: 1222 PSAGLPPVPVPTAKAPPVPA 1241
Score = 21.4 bits (43), Expect(2) = 6.2
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +1
Query: 496 PPPXGGGGGXXXXPPXAPXPPXPR 567
PP G PP + PP P+
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPK 1202
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +2
Query: 401 PPSXXPPPPXPXXXXXPAGGGGXPXXPXXPXPPPPXG 511
PP PPPP P G P P P PPPP G
Sbjct: 5 PPGNPPPPPPPP--------GFEP--PSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 389 PEXRPPSXXPPPPXP 433
P PPS PPPP P
Sbjct: 16 PGFEPPSQPPPPPPP 30
Score = 22.2 bits (45), Expect(2) = 6.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 388 GPPXPPPPP 362
G P PPPPP
Sbjct: 7 GNPPPPPPP 15
Score = 22.2 bits (45), Expect(2) = 6.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 385 PPXPPPPPXXP 353
PP PPPP P
Sbjct: 20 PPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +1
Query: 682 RPPXPXPPRP--XPPXPAAXP 738
RPP PPRP PP PA+ P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAP 158
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 746 PXXGXAAGXGGXGRGGXGXGGRGXXGXR 663
P G G GG RGG GGRG G R
Sbjct: 118 PLHGPHGGFGG--RGGGRMGGRGGRGRR 143
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 737 GXAAGXGGXGRGGXGXGGRGXXGXRG 660
G G GG GRGG GGRG G RG
Sbjct: 23 GGRGGFGG-GRGGARGGGRG--GARG 45
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 661 PRXPXXPRPPXPXPPRPXPPXPAAXP 738
P P PP P P P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPP 124
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 661 PRXPXXPRPPXPXPPRPXPPXPAAXP 738
P P PP P P P P P P
Sbjct: 115 PEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 670 PXXPRPPXPXPPRPXPPXPAA 732
P PP P PP P PP P A
Sbjct: 802 PFKAPPPAPLPP-PAPPLPTA 821
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.150 0.518
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,538,396
Number of Sequences: 5004
Number of extensions: 22517
Number of successful extensions: 256
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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