Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_L22
         (983 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    26   0.60 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   5.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   9.8  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.8 bits (54), Expect = 0.60
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 671 PPXPGPPXPPP 703
           PP P PP PPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 401 PPSXXPPPPXP 433
           PP   PPPP P
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 385 PPXPPPPPXXP 353
           PP P PPP  P
Sbjct: 338 PPKPAPPPPPP 348



 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +2

Query: 455 GGGGXPXXPXXPXPPPPXGG 514
           G    P  P  P PPP   G
Sbjct: 333 GDSDTPPKPAPPPPPPSSSG 352



 Score = 21.8 bits (44), Expect = 9.8
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 685 PPXPXPPRPXP 717
           PP P PP P P
Sbjct: 338 PPKPAPPPPPP 348


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 385  PPXPPPPP 362
            PP PPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -2

Query: 376  PPPPPXXPXGG 344
            PPPPP  P  G
Sbjct: 1355 PPPPPPPPSSG 1365


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 388  GPPXPPPPP 362
            G P PPPPP
Sbjct: 1855 GSPEPPPPP 1863


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = +2

Query: 416 PPPPXPXXXXXPAGGGGXPXXPXXPXPPPP 505
           P PP P     P    G       P P PP
Sbjct: 109 PRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138



 Score = 21.8 bits (44), Expect = 9.8
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = +2

Query: 416 PPPPXPXXXXXPAGGGGXPXXPXXPXPPPP 505
           P PP P     P    G       P P PP
Sbjct: 135 PRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 521 PPPPPXGGG 495
           PPPPP  GG
Sbjct: 376 PPPPPIRGG 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.150    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,953
Number of Sequences: 438
Number of extensions: 5931
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)