Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L21
(935 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0131 + 888247-888771,889092-889154 34 0.14
08_02_0186 + 13965960-13966424 30 2.3
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 29 4.0
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 4.0
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 5.3
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 5.3
09_02_0543 + 10427321-10428315,10428440-10429154 29 5.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.3
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 7.0
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 9.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.3
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 9.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 9.3
03_05_0543 - 25404630-25405408,25405461-25405605 28 9.3
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPX-QAPXLRPSCSEPWPLTGIPVPPFPPLS 706
PPP S + +V G P + P P + P LR S P P+T P PP PPL+
Sbjct: 109 PPPPLSEFPVLREVPSGPDPITSDPPPPPPPLSEFPVLREVPSGPDPITSDPPPPPPPLT 168
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLS 706
PP P+ + +V G P T P + P LR S P P+T P PP PPLS
Sbjct: 84 PPSTPTQFSVLRKVPTGPDPI-TSDPPPPPLSEFPVLREVPSGPDPITSDPPPPPPPLS 141
>08_02_0186 + 13965960-13966424
Length = 154
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 641 RPSCSEPWPLTGIPVPPFPPLSGXRGPXLHXPP 739
+P +P P+ G P PP PP S GP H PP
Sbjct: 55 QPPPGQPLPIYGYPSPP-PP-SQPAGPSSHTPP 85
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +2
Query: 527 LPPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLS 706
LPPP P D TP +++PG + + P+ P P PPLS
Sbjct: 220 LPPPTPPRPLPDMAGPSSATPLLPLQLPGLAGSSSAMSLPALQLPGMAGSSSAMPLPPLS 279
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 581 ETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGI-PVPPFPPLSGXRGPXLHXPP 739
+ P + P P AP P P P+ G P PP PPL+ GP PP
Sbjct: 271 QVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLA--NGPPRSIPP 322
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/56 (39%), Positives = 26/56 (46%)
Frame = +2
Query: 533 PP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPP 700
PP PS AQ G P + PG S P RP+ S+P+P G P P PP
Sbjct: 753 PPPPSSHAPHAQGPYGVPPGGDSR-PGYSQ---PEQRPAYSQPYPPYGAP-PQQPP 803
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +2
Query: 554 KIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSGXRGPXLHX 733
++D + G P ++ G A ++P P P PP PP S R P H
Sbjct: 183 RVDISMVVGTGPHG--RVTGADVEAAAGIKPKLKGPKGAP--PPPPPPPPSPHRHPAAHP 238
Query: 734 PPAXXYXXXR 763
PP + R
Sbjct: 239 PPPPHHPAPR 248
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 584 TPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSGXRGP 721
TP I G P AP + P P P + PP P ++ GP
Sbjct: 25 TPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGP 70
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = +2
Query: 584 TPTXTIKIPGXSPXQA-PXLRPSCSEPWPLTGIPVPPFPP--LSGXRGPXLHXPPA 742
TPT T P P P R P P +P PP PP +S P L PPA
Sbjct: 64 TPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAPPLPPPPA 119
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 608 PGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPL 703
P P P RP+ P P P+PP PPL
Sbjct: 715 PAQHPHLQPPARPAQQPPRPPVTQPLPPPPPL 746
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 286 NESAN---ARGEAVCVLGALPLPRSLTRCAR 369
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/70 (27%), Positives = 25/70 (35%)
Frame = +2
Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSG 709
PPP P + ++ G T + P P P + P P PP PP +
Sbjct: 665 PPPPPPPPRSSSRTPTGAA-TSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANR 723
Query: 710 XRGPXLHXPP 739
GP PP
Sbjct: 724 SNGPSAPAPP 733
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 587 PTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSGXRGPXLHXPPA 742
P T P P A + S PW P PP PP S + P + A
Sbjct: 585 PWATHSAPPPPPATADHSQSIASAPWATHNAPPPPPPPSSIEQPPATYGADA 636
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +2
Query: 605 IPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSGXRGPXLHXPPA 742
I G QAP P P + G+P PP P+ G GP PPA
Sbjct: 1127 IGGLGGHQAPPAPPL---PEGIGGVPPPP--PVGGLGGPPAPPPPA 1167
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Frame = +2
Query: 581 ETPTXTIKIPGXSPXQAPXLRPSCSEPW-----PLTGIPVPPFPP 700
+TP+ P SP P +P EP PL G+ PP PP
Sbjct: 112 KTPSPLTPSPTPSPVTPPPQQPPQPEPRRPPAAPLPGVRTPPSPP 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,609,113
Number of Sequences: 37544
Number of extensions: 317284
Number of successful extensions: 1029
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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