Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_L21
         (935 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    30   2.1  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    29   4.8  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   6.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   6.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   6.3  

>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +2

Query: 533 PP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSG- 709
           PP PS    D +    + PT  I     +P  AP +RP    P P++  P  P PPLS  
Sbjct: 285 PPVPSAQDQDFRPKTLK-PTSVIGSHAFAPVAAP-IRPMIPVPPPVSVAPFVPAPPLSSA 342

Query: 710 --XRGPXLHXP 736
              + P  H P
Sbjct: 343 PPFQHPQQHHP 353


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +2

Query: 527 LPPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLS 706
           +PPP P    + A       P      P   P       P    P P+ G P PP PP  
Sbjct: 541 IPPPPPIAGLLAANGTNVPIPPPP---PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597

Query: 707 GXRGP 721
           G  GP
Sbjct: 598 GLMGP 602


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 23/70 (32%), Positives = 26/70 (37%)
 Frame = +2

Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSG 709
           PPP P +  I         P     I G  P   P   P    P P++G P PP PP  G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PG-GLP-PISGGPPPPPPPPGG 767

Query: 710 XRGPXLHXPP 739
              P    PP
Sbjct: 768 CPPPPPPPPP 777


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 23/70 (32%), Positives = 26/70 (37%)
 Frame = +2

Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSG 709
           PPP P +  I         P     I G  P   P   P    P P++G P PP PP  G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PG-GLP-PISGGPPPPPPPPGG 767

Query: 710 XRGPXLHXPP 739
              P    PP
Sbjct: 768 CPPPPPPPPP 777


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 23/70 (32%), Positives = 26/70 (37%)
 Frame = +2

Query: 530 PPP*PSIXKIDAQVXXGETPTXTIKIPGXSPXQAPXLRPSCSEPWPLTGIPVPPFPPLSG 709
           PPP P +  I         P     I G  P   P   P    P P++G P PP PP  G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP---PG-GLP-PISGGPPPPPPPPGG 350

Query: 710 XRGPXLHXPP 739
              P    PP
Sbjct: 351 CPPPPPPPPP 360


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,224,595
Number of Sequences: 27780
Number of extensions: 241326
Number of successful extensions: 639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)