Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_L19
         (1069 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.12 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.6  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   4.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.1  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    22   8.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 0.12
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +2

Query: 104 PXTXXPXPXPPPXXXPRXPPXPPPPXXXGGPIXG 205
           P +  P P P P   P+ P    PP    GP  G
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPG 49



 Score = 26.6 bits (56), Expect = 0.38
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +2

Query: 287 PPPRP-PXXXEXAPXAXPPPPXXRAXXPSPXPPPXXTPXPPP 409
           P P+P P     AP    PP       PS  PPP   P  PP
Sbjct: 21  PGPQPSPHQSPQAPQRGSPP------NPSQGPPPGGPPGAPP 56



 Score = 23.8 bits (49), Expect = 2.7
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +1

Query: 172 PPXXXGGAXXGPRQTXKHXPRRG----PXXGXPPPPXKPXXPPTPXP 300
           P     G    P Q+ +  P+RG    P  G PPP   P  PP+  P
Sbjct: 16  PSSGAPGPQPSPHQSPQ-APQRGSPPNPSQG-PPPGGPPGAPPSQNP 60



 Score = 23.4 bits (48), Expect = 3.5
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +2

Query: 83  PXKXHPPPXTXXPXPXPPPXXXPRXPPXPPPPXXXGGPIXG 205
           P +  PP     P   PPP   P  PP   P      P  G
Sbjct: 34  PQRGSPP----NPSQGPPPGGPPGAPPSQNPSQMMISPASG 70



 Score = 23.0 bits (47), Expect = 4.6
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 151 PXAPXPPPPXXXGGAXXGPRQTXKHXPRRGPXXGXPP--PP 267
           P +  P P      +   P++     P +GP  G PP  PP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = +2

Query: 974  PXPAPPPPXXPXPPPLRRAXXXPLTXAPPPPP 1069
            P P PP P     P        P+    P PP
Sbjct: 107  PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 138



 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/32 (31%), Positives = 11/32 (34%)
 Frame = +2

Query: 974  PXPAPPPPXXPXPPPLRRAXXXPLTXAPPPPP 1069
            P P PP P     P        P+    P PP
Sbjct: 133  PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 149 PRXPPXPPPPXXXGGP 196
           P  P  PPPP    GP
Sbjct: 338 PPKPAPPPPPPSSSGP 353



 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 986  PPPPXXPXPPP 1018
            PP P  P PPP
Sbjct: 338  PPKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 974 PXPAPPPP 997
           P PAPPPP
Sbjct: 339 PKPAPPPP 346


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 11/37 (29%), Positives = 11/37 (29%)
 Frame = +2

Query: 272 NXXXHPPPRPPXXXEXAPXAXPPPPXXRAXXPSPXPP 382
           N    PP RP      A     P        P P PP
Sbjct: 19  NTNLDPPTRPTRLRREAKPEAEPGNNRPVYIPQPRPP 55


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 11/37 (29%), Positives = 11/37 (29%)
 Frame = +2

Query: 272 NXXXHPPPRPPXXXEXAPXAXPPPPXXRAXXPSPXPP 382
           N    PP RP      A     P        P P PP
Sbjct: 20  NTNLDPPTRPTRLRREAEPEAEPGNNRPVYIPQPRPP 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.150    0.543 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,054
Number of Sequences: 438
Number of extensions: 8920
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35668296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)