Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L15
(984 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.082
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.25
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.44
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.44
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.76
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.4
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +2
Query: 788 PPPPPXXXPXPPXXXPL---PPTXXPPXLPXS 874
PPPPP P PP P+ PP+ PP LP S
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 811 PPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXPPP 918
PPPPP P P P P PS PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAG---------PPSAPPP 1733
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.7 bits (71), Expect = 0.082
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 793 PPPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXPPPXHT 927
P P PPPPP PP + P R + PPP T
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPAT 278
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 788 PPPPPXXXPXPPXXXPLPPTXXPPXLPXSGXXPGXXXLP 904
P PP P P PP PP LP +P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.25
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 886 GXXAGGR*GGGXXXGGXGGXXGGXGXXGRGG 794
G GGR G GG GG GG GRGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 885 GXXPEXGRXGGXXVGGRGXXWGGXGXXXGGGGG 787
G G GG GGRG GG G GGG G
Sbjct: 10 GRGGSRGGRGGFN-GGRGGFGGGRGGARGGGRG 41
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 886 GXXAGGR*GGGXXXGGXGGXXGGXGXXGRGG 794
G GGR G G GG G G GRGG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 889 PGXXAGGR*GGGXXXGGXGGXXGGXGXXGRGG 794
PG GG G G GG GG GG G G GG
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGFG-GGPGG 267
Score = 30.3 bits (65), Expect = 0.44
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 889 PGXXAGGR*GGGXXXGGXGGXXGGXGXXG 803
PG GG G G GG GG GG G G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 918 GWRXGGSXXXPGXXPEXGRXGGXXVGGRGXXWGGXGXXXGGGGG 787
G GG PG G +GG G GG G GG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.44
Identities = 32/132 (24%), Positives = 39/132 (29%), Gaps = 3/132 (2%)
Frame = +3
Query: 189 PKLXLGXXGXPPPHPXXXEKNXXXKRGXPXKPPXFPXXPXGGXTPXXLSXSXXXAXXPXL 368
P + + P P P G P PP P P + S P +
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP--SSEIPSIPAPSGA----PPV 1085
Query: 369 PXPXGXKKXXPXXXFFPPPPKKXXXFS---AKNXSPPPPXXXXXXXXXXPPPXXXFLLPX 539
P P G PP PK A + +PP P P P +P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV-PVPSGAPPVPK 1144
Query: 540 PXXXXPPSPXPS 575
P PP P PS
Sbjct: 1145 PSVAAPPVPAPS 1156
Score = 30.3 bits (65), Expect = 0.44
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 360 PXLPXPXGXKKXXPXXXFFPPPPKKXXX---FSAKNXSPPPPXXXXXXXXXXPPPXXXFL 530
P +P P P PP PK A + PP PPP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 531 LPXPXXXXPPSPXPS 575
+P P PP P PS
Sbjct: 1200 VPKPSVGVPPVPPPS 1214
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 833 PLPPTXXPPXLPXSGXXPGXXXLPPLLHPXTXP 931
P P PP LP S PP HP + P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 793 PPPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXPP 915
P P PP P PP P P P+ L + PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +1
Query: 784 LPXPPPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXP 912
+P P P PP P PP P P PS P
Sbjct: 149 IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +1
Query: 796 PPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXP 912
PP PP P PP P P P+ P+ P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 791 PPPPXXXPXPPXXXPLPP 844
PPPP P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 791 PPPPXXXPXPPXXXPLPPTXXPPXLPXSGXXPGXXXLPP 907
PP P PP P P PP LP P LPP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGA--PAAPPLPP 451
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 788 PPPPPXXXPXPPXXXPLPP---TXXPPXLPXSGXXPGXXXLPPL 910
PPPPP PLPP + PP P S G PPL
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPL 379
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 784 LPXPPPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXPPP 918
+P PP PPPP PP T +R P PPP
Sbjct: 351 IPLPPQGRSAPPPP--PPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 25.8 bits (54), Expect = 9.4
Identities = 32/124 (25%), Positives = 34/124 (27%), Gaps = 5/124 (4%)
Frame = +3
Query: 219 PPPHPXXXEKNXXXKRGXPXKPPXFPXXPXGGXTPXXLSXSXXXAXXPXLPXPXGXKKXX 398
PPP P +N RG KPP P A LP P G
Sbjct: 311 PPPPPPPSRRN----RG---KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPP 362
Query: 399 PXXXFFPP-----PPKKXXXFSAKNXSPPPPXXXXXXXXXXPPPXXXFLLPXPXXXXPPS 563
P P PP + N PPP PP P PPS
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 564 PXPS 575
PS
Sbjct: 423 LPPS 426
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 787 PXPPPXXXPPPPPXXPPXP 843
P PPP PP P PP P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 793 PPPXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPS 906
PP PPPPP P P P R TP+
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPA 42
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 788 PPPPPXXXPXPPXXXPLPP 844
PPPPP PP P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 417 PPPPKKXXXFSAKNXSPPPP 476
PPPP F + PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 788 PPPPPXXXPXPPXXXPLPPTXXPPXLPXSGXXP 886
PPPPP P P+P PP P G P
Sbjct: 733 PPPPPAVIVPTPAPAPIP---VPPPAPIMGGPP 762
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 417 PPPPKKXXXFSAKNXSPPPPXXXXXXXXXXPPPXXXFLLPXPXXXXPPSPXPS 575
PPPP A P PP PPP P PP P S
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = +1
Query: 787 PXPP----PXXXPPPPPXXPPXPHXXTPXPTXLRXXTRXXXTPSXPPP 918
P PP P P P P PP P P P P PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 784 LPXPPPXXXPPPPPXXPPXPHXXTPXP 864
+P P P PPPP PP P P
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 791 PPPPXXXPXPPXXXPLPPTXXPPXLPXSG 877
PPPP P P PP PP + G
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
Frame = +1
Query: 787 PXPPPXXX---PPPPPXXPP 837
P PPP PPPPP PP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +2
Query: 788 PPPPPXXXP--XPPXXXP---LPPTXXPPXLPXSGXXPGXXXLPPL 910
PPPPP P PP P LPP P PG PL
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPL 1928
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -3
Query: 871 GR*GGGXXXGGXGGXXGGXGXX---GRGGG 791
GR G G GG GG GG G G GGG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGG 165
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 874 GGR*GGGXXXGGXGGXXGGXGXXGRGG 794
GG GG G GG GG RGG
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,160,342
Number of Sequences: 5004
Number of extensions: 34491
Number of successful extensions: 294
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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