Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L11
(947 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.015
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.025
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 33 0.078
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.078
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.015
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPF--PYLTPPXXSLPXXAXPPTXP 867
P P P P PP P P P+P P P + P P A P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 868 XXPXPPXQXP 897
PP P
Sbjct: 1165 SVAAPPVPAP 1174
Score = 32.7 bits (71), Expect = 0.078
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRA---PFPYLTPPXXSLPXXAXPPTX 864
P P E P P PP P P P P A P P + P P A P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPS-GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK 1125
Query: 865 PXXPXPPXQXP 897
P PP P
Sbjct: 1126 PSVAAPPVPVP 1136
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P P P P PP P P P+P + P + P +P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAP--PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 874 PXPPXQXP 897
P P P
Sbjct: 1201 PKPSVGVP 1208
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPF--PYLTPPXXSLPXXAXPPTXP 867
PLP + P P + PP +P P P AP P + P +P P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPT-STPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 868 XXPXPPXQXP 897
P P P
Sbjct: 1084 PVPAPSGIPP 1093
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPF--PYLTPPXXSLPXXAXPPTXP 867
P P P + PP P P P P P P + P +P A P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 868 XXPXPPXQXP 897
PP P
Sbjct: 1146 SVAAPPVPAP 1155
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXS---PLPXXRAPFPYLTPPXXS----LPXXAXPP 858
PP P P P P P S P+P A P + PP + P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 859 TXPXXPXPPXQXP 897
P PP P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P P P P PP P P P P P P TP P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP--TPSAGLPPVPVPTAKAPPV 1239
Query: 874 PXPPXQXP 897
P P + P
Sbjct: 1240 PAPSSEAP 1247
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLT--PPXXSLPXXAXPPTXPXX 873
PP P + PP P P P P P P + PP A P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 874 PXPPXQXP 897
PP P
Sbjct: 1110 AVPPVPAP 1117
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P P P P PP P P P P P P P + P A P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP--KPSVAAPPVPAPSSGIPPV 1181
Query: 874 PXPPXQXP 897
P P P
Sbjct: 1182 PKPAAGVP 1189
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = +1
Query: 697 LPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXP 876
+PP P P PP P P +P P P PP + P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP--VPPPSTAPPVPTPSAGLPPVPVPTAK 1235
Query: 877 XPPXQXP 897
PP P
Sbjct: 1236 APPVPAP 1242
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRA---PFPYLTPPXXSLPXXAXP-PT 861
P P P P + PP P P P+P +A P P P S P + P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPH 1260
Query: 862 XPXXPXP 882
P P
Sbjct: 1261 SNASPSP 1267
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
PP E P P PP P P P P P P P + P A P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP-PVPVPTAKAPPVPAPSSEAPSVST 1251
Query: 880 PPXQXP 897
P P
Sbjct: 1252 PRSSVP 1257
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +1
Query: 700 PPXETPXXXXPXSXP---PPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
PP + P P S P P P P P+P + P + P P P T P
Sbjct: 986 PPKDHPPSA-PLSKPVSTSPAAPLARVP--PVPKLSSKAPPVPLPSADAPPIPVPSTAPP 1042
Query: 871 XPXPPXQXP 897
P P P
Sbjct: 1043 VPIPTSTPP 1051
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXS---PLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
PP P P PP P P + P+P A P + P P + P +
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Query: 871 XP 876
P
Sbjct: 1258 SP 1259
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/65 (24%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 709 ETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPT--XPXXPXP 882
+ P P + PP P P+P P P + S P P+ P P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 883 PXQXP 897
P
Sbjct: 1080 SGAPP 1084
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Frame = +1
Query: 712 TPXXXXPXSXP---PPXLPXYXXPXSPLPXXRA-PFPYLTPPXXSLP--XXAXPPTXPXX 873
TP P S P PP LP P P+ A P P P LP A PP P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 874 PXPP 885
P PP
Sbjct: 474 PAPP 477
Score = 29.5 bits (63), Expect = 0.72
Identities = 24/75 (32%), Positives = 25/75 (33%), Gaps = 9/75 (12%)
Frame = +1
Query: 700 PPXETPXXXXPXSXP------PPXLPXYXXPXSPLPXXRA---PFPYLTPPXXSLPXXAX 852
PP TP P + P PP LP PLP P P P LP A
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA- 473
Query: 853 PPTXPXXPXPPXQXP 897
P P P P P
Sbjct: 474 -PAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 5/69 (7%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAP-----FPYLTPPXXSLPXXAXPP 858
P PP P P P P P P P P PP + A PP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 859 TXPXXPXPP 885
P P P
Sbjct: 449 LPPSAPIAP 457
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPF-PYLTPPXXSLPXXAXPPTXPX 870
P PP P S PP P P S P + P L PP + A
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 871 XPXPP 885
P PP
Sbjct: 311 PPPPP 315
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 22/68 (32%), Positives = 24/68 (35%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P P TP P S PP + P P P P P PP + P A PP P
Sbjct: 1683 PAHPVSTPPVR-PQSAAPPQMSA---PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 874 PXPPXQXP 897
P P
Sbjct: 1739 SAPSVPNP 1746
Score = 33.1 bits (72), Expect = 0.059
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRA 801
P PP P P S PPP LP P P P R+
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRS 1750
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 32.7 bits (71), Expect = 0.078
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 748 PXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXA-XPPTXPXXPXPPXQXP 897
P + Y P SPLP P P+ +P S P A P T P PP P
Sbjct: 295 PPMGMYPLPFSPLPSAAPPIPF-SPNVSSHPHMAFLPATVPTHSAPPGFVP 344
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.078
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
PP + P S PP P S P + P +PP A PP P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 880 PP 885
PP
Sbjct: 204 PP 205
Score = 29.9 bits (64), Expect = 0.55
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPP-PXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
P PP P S PP P +P P P P P PP +P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPP------PSPASAPPIPSKAPP---IPSSLPPPAQPA 178
Query: 871 XP 876
P
Sbjct: 179 AP 180
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +1
Query: 697 LPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXP 876
+PP TP P PPP P P S + P + +L P P P
Sbjct: 223 IPPTYTPKQADPLPAPPPPPPPTLPPQS---TNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Query: 877 XPPXQXP 897
P + P
Sbjct: 280 SQPPRPP 286
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXX-PXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
P PP P PP P P P P AP P P P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPV-APVAPEVPSVPQRPAVPVVPEAPS 633
Query: 871 XPXPP 885
P PP
Sbjct: 634 VPQPP 638
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,483,495
Number of Sequences: 5004
Number of extensions: 14512
Number of successful extensions: 102
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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