Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L11
(947 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 39 0.005
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 39 0.006
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 36 0.032
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.074
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.074
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 35 0.074
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 35 0.074
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 34 0.17
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 34 0.17
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.23
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 33 0.30
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.30
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.39
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.39
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.39
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.69
AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical ... 32 0.69
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.91
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.1
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 4.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.4
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 6.4
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +1
Query: 730 PXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQXP 897
P PPP P P P P P PP P PP P P PP P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXX-RAPFPYLTPPXXSLPXXAXPPTXPX 870
P PP + P + PPP P P AP + PP + A P P
Sbjct: 180 PRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEPS 239
Query: 871 XPXPPXQXP 897
P PP + P
Sbjct: 240 DPAPPSKLP 248
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 36.3 bits (80), Expect = 0.032
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +1
Query: 703 PXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXP-PTXPXXPX 879
P +T P P +P P +P P P P PP S P A P P P P
Sbjct: 45 PQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAP--APPLASYPQNAVPVPAPPPAPY 102
Query: 880 PPXQXP 897
P P
Sbjct: 103 PQHAVP 108
Score = 35.9 bits (79), Expect = 0.042
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Frame = +1
Query: 694 PLPPXET-PXXXXPXSXPPPX------LPXYXXPXSPLPXXR--APFPYLTPPXXSLPXX 846
P PP + P P PPP +P P +P P AP PY P P
Sbjct: 80 PAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Query: 847 AXPPTXPXXPXPP 885
PP P P PP
Sbjct: 140 HYPPPPPHYPPPP 152
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 5/73 (6%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPP-XLPXYXXPXSPLPXXRAP---FPYLTPPXXSLPXXAXP-P 858
P PP P P PPP P + P P P P PP P A P P
Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAP 110
Query: 859 TXPXXPXPPXQXP 897
P P P P
Sbjct: 111 APPPAPYPQHAVP 123
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPX-LPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
PP P P PPP P + P +P P + P P PP P PP P
Sbjct: 98 PPAPYPQHAVPAPAPPPAPYPQHAVP-APAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 730 PXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXP-PTXPXXPXPPXQXP 897
P PPP P S P AP PP P A P P P P P P
Sbjct: 26 PPPPPPPPKPAPYVEQSAQPQQTAP----PPPPAPYPQQAVPAPAPPPAPYPQHAVP 78
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.074
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTP--PXXSLPXXAXPPTXP 867
P+PP P PPP P P P R P P P P P PP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 868 XXPXPP 885
P PP
Sbjct: 332 GMPPPP 337
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +1
Query: 688 YXPLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
Y P+PP P P P P P P P P +P PP PP P
Sbjct: 260 YPPVPPP--PPSVTPMPPPMPPTPG-MTPRPPPPPSSGMWP--PPPPPPPGRTPGPPGMP 314
Query: 868 XXPXPP 885
P PP
Sbjct: 315 GMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.074
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTP--PXXSLPXXAXPPTXP 867
P+PP P PPP P P P R P P P P P PP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 868 XXPXPP 885
P PP
Sbjct: 342 GMPPPP 347
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = +1
Query: 688 YXPLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
Y P+PP P P P P P P P P +P PP PP P
Sbjct: 270 YPPVPPP--PPSVTPMPPPMPPTPG-MTPRPPPPPSSGMWP--PPPPPPPGRTPGPPGMP 324
Query: 868 XXPXPP 885
P PP
Sbjct: 325 GMPPPP 330
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
PPP LP P P P P P + PP P A PP P P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPP----PIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
PPP LP P P P P P + PP P A PP P P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPP----PIPASPPPRPPASEP 340
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPX-LPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
P+P P P + PPP P P +P P Y P +P PP P
Sbjct: 144 PMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAY---PPPRMPIGHGPPGGPP 200
Query: 871 XPXPP 885
P PP
Sbjct: 201 MPGPP 205
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQXP 897
PP +P P P AP Y+ PP +P PP P PP P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPP--GMPGAYPPPRMPIGHGPPGGPP 200
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 33.9 bits (74), Expect = 0.17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPX-LPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPX 870
P+P P P + PPP P P +P P Y P +P PP P
Sbjct: 144 PMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAY---PPPRMPIGHGPPGGPP 200
Query: 871 XPXPP 885
P PP
Sbjct: 201 MPGPP 205
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQXP 897
PP +P P P AP Y+ PP +P PP P PP P
Sbjct: 151 PPRGMPGAYPPPRGYPPAPAPGVYMPPP--GMPGAYPPPRMPIGHGPPGGPP 200
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPX--SPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
P P P P PPP P P P R P P+ PP P PP P
Sbjct: 25 PPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPP 84
Query: 868 XXPXPPXQ 891
P Q
Sbjct: 85 PPEPEPQQ 92
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.23
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P S PPP P P P R P TPP P PP P
Sbjct: 140 PPPPPRVPRTPPPRS-PPPRRPPMTPPS---PQRRPP---RTPPS---PEPRNPPRTPPS 189
Query: 874 PXPP 885
P PP
Sbjct: 190 PIPP 193
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/66 (28%), Positives = 23/66 (34%)
Frame = +1
Query: 688 YXPLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
Y P TP P PP +P P ++P P P + P PP P
Sbjct: 461 YSSTTPPTTPKPAPP---PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPP 517
Query: 868 XXPXPP 885
P PP
Sbjct: 518 PPPPPP 523
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPT---- 861
P P P PPP + P + P P L PP S+P PPT
Sbjct: 91 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP----PMSLLGPPPFSVPPSVPPPTSSAA 146
Query: 862 XPXXPXPPXQ 891
P P PP Q
Sbjct: 147 APIVPPPPVQ 156
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPT---- 861
P P P PPP + P + P P L PP S+P PPT
Sbjct: 114 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP----PMSLLGPPPFSVPPSVPPPTSSAA 169
Query: 862 XPXXPXPPXQ 891
P P PP Q
Sbjct: 170 APIVPPPPVQ 179
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPT---- 861
P P P PPP + P + P P L PP S+P PPT
Sbjct: 364 PFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPP----PMSLLGPPPFSVPPSVPPPTSSAA 419
Query: 862 XPXXPXPPXQ 891
P P PP Q
Sbjct: 420 APIVPPPPVQ 429
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP +P S PPP P P P P P +PP PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 874 PXPP 885
P PP
Sbjct: 298 PPPP 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
PP T P + PP P P P P P PP S P + PP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP---PPRGSPPTGSLPPPQAGGSP 321
Query: 880 PP 885
PP
Sbjct: 322 PP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP +P S PPP P P P P P +PP PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 874 PXPP 885
P PP
Sbjct: 319 PPPP 322
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
PP T P + PP P P P P P PP S P + PP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP---PPRGSPPTGSLPPPQAGGSP 342
Query: 880 PP 885
PP
Sbjct: 343 PP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP +P S PPP P P P P P +PP PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPP--PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 874 PXPP 885
P PP
Sbjct: 304 PPPP 307
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
PP T P + PP P P P P P PP S P + PP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP---PPRGSPPTGSLPPPQAGGSP 327
Query: 880 PP 885
PP
Sbjct: 328 PP 329
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +1
Query: 688 YXPLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXP 867
Y P TP P PP +P P ++P PP LP A P + P
Sbjct: 454 YSSTTPPTTPKPAPP---PPSRIPNPSPSPQPAEVSKSP-----PPPPPLPPIATPSSVP 505
Query: 868 XXPXPP 885
P PP
Sbjct: 506 PPPPPP 511
>AC006834-6|AAF40004.1| 233|Caenorhabditis elegans Hypothetical
protein ZK973.9 protein.
Length = 233
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPP 885
PPP P + P + R P+PY P PP PP
Sbjct: 177 PPPVYPPFGQPAPQMSGQRMPYPYPPQGMPGYPGGPPPPPHGYEGYPP 224
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQXP 897
PPP P P SP P PP S P PP P P PP Q P
Sbjct: 324 PPPPPPMKLDP-SPQPAATPVEITEIPPIIS-PPAPPPPPPPPPPPPPPQTP 373
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 31.5 bits (68), Expect = 0.91
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQXP 897
PP P P P P P + PP P PPT P PP P
Sbjct: 367 PPKTDPPRTEPPKTEPPTTEP-PKIEPPRTEPPKTEPPPTEPPKTEPPKTTP 417
Score = 31.5 bits (68), Expect = 0.91
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
P + P P + PP P P P P P PP P P T P
Sbjct: 368 PKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEP-PPTEPPKTEPPKTTPPKTEPPTTE 426
Query: 880 PP 885
PP
Sbjct: 427 PP 428
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 715 PXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPPXQX 894
P P + PP P P P P P PP P P T P PP
Sbjct: 368 PKTDPPRTEPPKTEPPTTEPPKIEPPRTEP-PKTEPPPTEPPKTEPPKTTPPKTEPPTTE 426
Query: 895 P 897
P
Sbjct: 427 P 427
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
P E P P + PP P P P P PP P P T P
Sbjct: 606 PMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTLP-PETVPPNTEAPRTEVPMTVPPRTE 664
Query: 880 PP 885
PP
Sbjct: 665 PP 666
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPF---PYLTPPXXSLPXXAXPPTXPX 870
P E P P + PP P + P AP P PP P P T P
Sbjct: 566 PRTEAPRTEPPRTEPPKT----EAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEPP 621
Query: 871 XPXPPXQXP 897
PP P
Sbjct: 622 KTEPPRTAP 630
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPX 879
P E P P + P +P P R P PP P A P T
Sbjct: 581 PKTEAPRTVRPKTEAPMTVPPRTEPPMT-EAPRTEVPMTEPPKTEPPRTAPPRTEVSMTL 639
Query: 880 PPXQXP 897
PP P
Sbjct: 640 PPETVP 645
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P PPP P P + P P P PP P PP
Sbjct: 714 PPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCP 769
Query: 874 PXPPXQXP 897
P PP P
Sbjct: 770 PPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +1
Query: 700 PPXETPXXXXPXSX--PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
PP P P + PPP P P S P P P PP P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 874 PXPP 885
P PP
Sbjct: 787 PPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P PPP P P + P P P PP P PP
Sbjct: 714 PPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCP 769
Query: 874 PXPPXQXP 897
P PP P
Sbjct: 770 PPPPPPPP 777
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +1
Query: 700 PPXETPXXXXPXSX--PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
PP P P + PPP P P S P P P PP P P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 874 PXPP 885
P PP
Sbjct: 787 PPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P PPP P P + P P P PP P PP
Sbjct: 297 PPPPGLPPITGGP---PPPPPPGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCP 352
Query: 874 PXPPXQXP 897
P PP P
Sbjct: 353 PPPPPPPP 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Frame = +1
Query: 700 PPXETPXXXXPXSX--PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
PP P P + PPP P P S P P P PP P P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 874 PXPP 885
P PP
Sbjct: 370 PPPP 373
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 697 LPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPP 858
LPP P + PPP +P Y P P P P P PP P PP
Sbjct: 694 LPPGVPPMFNL-NAPPPPGIPGYP-PAPPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P PPP P +P P P PP P PP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTG---VPLPVPPPPPLFSPSMILPPPPPPL 1396
Query: 874 PXPPXQXP 897
P + P
Sbjct: 1397 PSEEKKNP 1404
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/65 (26%), Positives = 22/65 (33%)
Frame = +1
Query: 703 PXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
P P + PPP + +P P + P + PP S A P P P
Sbjct: 111 PATQPSMNGHHAPPPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPP 170
Query: 883 PXQXP 897
P P
Sbjct: 171 PAPTP 175
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 5/69 (7%)
Frame = +1
Query: 700 PPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLP-----XXAXPPTX 864
PP P P PP P P P P PP P A P
Sbjct: 295 PPKPVPQQTPPVQQAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAVQQAQAPVV 354
Query: 865 PXXPXPPXQ 891
P PP Q
Sbjct: 355 QQAPAPPVQ 363
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P PPP P P P P R P + P P
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVPQYYQPMM 115
Query: 874 PXP 882
P P
Sbjct: 116 PQP 118
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 703 PXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
P P P PP P Y P P AP+ Y PP P P P
Sbjct: 105 PPGYPAGYPPYGMPPRHHPGYPHPAYGYPPPGAPYGY--PPQMMRPPMMAPGDMVRMPPG 162
Query: 883 P 885
P
Sbjct: 163 P 163
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 703 PXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
P P P PPP P S AP P PP LP P P P
Sbjct: 601 PENRPHAVPPPPPPPPPQSFGMAPISSA----APPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Query: 883 P 885
P
Sbjct: 657 P 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 703 PXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXP 882
P P P PPP P S AP P PP LP P P P
Sbjct: 427 PENRPHAVPPPPPPPPPQSFGMAPISSA----APPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Query: 883 P 885
P
Sbjct: 483 P 483
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P P P +P + P +TPP P PP P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGL--PGNPGRPPQQPCEPITPPPCK-PCPQGPPGPPGP 158
Query: 874 PXPP 885
P PP
Sbjct: 159 PGPP 162
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 694 PLPPXETPXXXXPXSXPPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXX 873
P PP P P P P +P + P +TPP P PP P
Sbjct: 102 PGPPGPAGTPGKPGRPGKPGAPGL--PGNPGRPPQQPCEPITPPPCK-PCPQGPPGPPGP 158
Query: 874 PXPP 885
P PP
Sbjct: 159 PGPP 162
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 757 PXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPP 885
P Y P P + P PP S PPT P PP
Sbjct: 412 PYYSPPSYPTQQQSSYVPSAVPPMFSATSAPTPPTSYVNPIPP 454
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +1
Query: 742 PPPXLPXYXXPXSPLPXXRAPFPYLTPPXXSLPXXAXPPTXPXXPXPP 885
P P +P P P P P ++ P P A P P P P
Sbjct: 126 PGPAVPAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAPGPVAPPTPSGP 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,764,646
Number of Sequences: 27780
Number of extensions: 105478
Number of successful extensions: 812
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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