Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L07
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 308 3e-84
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 29 4.4
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 29 5.9
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 7.8
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 308 bits (757), Expect = 3e-84
Identities = 144/173 (83%), Positives = 162/173 (93%)
Frame = +2
Query: 149 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 328
RPFEK RLDQELK+IG +GL+NKREVWRVKYTLA++RKAARELLTLE+KDPKRLFEGNAL
Sbjct: 17 RPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNAL 76
Query: 329 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 508
LRRLV+IGVLDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKSIHHARILI+Q HIRV
Sbjct: 77 LRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRV 136
Query: 509 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGAANDE 667
R+QVV++PSFIVRLDS KHIDFSL+SP+GGGRPGRVKR+ LRKG G G ++E
Sbjct: 137 RRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKGDGAGGDDEE 189
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 215 KREVWRVKYTLA-RIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVL 391
KRE + + TLA + R+ A + L E DP R +L + G++ L+ +
Sbjct: 40 KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIG 98
Query: 392 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHID 571
+ F RRL + G+ +S+ A L+ Q H+R+ ++V P+F+V S I
Sbjct: 99 KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMIT 158
Query: 572 FSLKS 586
++ S
Sbjct: 159 WTKAS 163
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 364 KTDETRLCAWSE---D*GLLGASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPI 534
KTDE A S+ D G +SA A V + P + S NFD K SC C PI
Sbjct: 107 KTDEIVESAESDSSSDTDYFGEASASAPVSN-PALTYLSGANFDNVKQPSCQMLGCTGPI 165
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 770 PXAGXPPXXGXXXXPPXXXPXXXXXPPPPXP 862
P G PP G PP PPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 785 PPXXGXXXXPPXXXPXXXXXPPPPXP 862
PP G PP P PPPP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 770 PXAGXPPXXGXXXXPPXXXPXXXXXPPPPXP 862
P G PP G PP PPPP P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 785 PPXXGXXXXPPXXXPXXXXXPPPPXP 862
PP G PP P PPPP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 770 PXAGXPPXXGXXXXPPXXXPXXXXXPPPPXP 862
P G PP G PP PPPP P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 785 PPXXGXXXXPPXXXPXXXXXPPPPXP 862
PP G PP P PPPP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP 315
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 527 CSQLACGHEYAFAGSKFWHDG 465
C + CG E+ F K WH+G
Sbjct: 152 CQRPGCGREFCFKCRKVWHEG 172
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 530 GCSQLACGHEYAFAGSKFWH 471
GC +L +EY FA K WH
Sbjct: 339 GCDELIFANEYTFAEEKSWH 358
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 425 DDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHY--LRTISWGPS 291
+DA + Q+S A + + ++H V + E +GH+ + T++W PS
Sbjct: 252 EDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPS 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,632,577
Number of Sequences: 27780
Number of extensions: 343614
Number of successful extensions: 1123
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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